<HashMap><database>biostudies-literature</database><scores/><additional><submitter>Granai M</submitter><funding>Ministry of Educatio (I)</funding><funding>Ministry of Educatio</funding><pagination>143-150</pagination><full_dataset_link>https://www.ebi.ac.uk/biostudies/studies/S-EPMC7320062</full_dataset_link><repository>biostudies-literature</repository><omics_type>Unknown</omics_type><volume>477(1)</volume><pubmed_abstract>The precise B cell of origin and molecular pathogenesis of nodal marginal zone lymphoma (NMZL) remain poorly defined. To date, due to the rarity of NMZL, the vast majority of already-published studies have been conducted on a limited number of samples and the technical approach to analyze the immunoglobulin genes was of amplifying rearranged variable region genes with the classical direct sequencing of the PCR products followed by cloning. Here, we studied the B cell Ig heavy-chain repertoires by next-generation sequencing (NGS) in 30 NMZL cases. Most of the cases were mutated (20/28; 71.5%) with homologies to the respective germ line genes ranging from 85 to 97, 83%, whereas 8/28 (28.5%) were unmutated. In addition, our results show that NMZL cases have a biased usage of specific immunogl</pubmed_abstract><journal>Virchows Archiv : an international journal of pathology</journal><pubmed_title>IGHV mutational status of nodal marginal zone lymphoma by NGS reveals distinct pathogenic pathways with different prognostic implications.</pubmed_title><pmcid>PMC7320062</pmcid><funding_grant_id>0</funding_grant_id><pubmed_authors>Vergoni F</pubmed_authors><pubmed_authors>Aversa S</pubmed_authors><pubmed_authors>Amato T</pubmed_authors><pubmed_authors>Cevenini G</pubmed_authors><pubmed_authors>Carta AG</pubmed_authors><pubmed_authors>Santi R</pubmed_authors><pubmed_authors>Lazzi S</pubmed_authors><pubmed_authors>Cencini E</pubmed_authors><pubmed_authors>Leoncini L</pubmed_authors><pubmed_authors>Mancini V</pubmed_authors><pubmed_authors>Granai M</pubmed_authors><pubmed_authors>Di Napoli A</pubmed_authors><pubmed_authors>Ziepert M</pubmed_authors><pubmed_authors>Di Stefano G</pubmed_authors><pubmed_authors>Kovalchuk S</pubmed_authors><pubmed_authors>Bellan C</pubmed_authors></additional><is_claimable>false</is_claimable><name>IGHV mutational status of nodal marginal zone lymphoma by NGS reveals distinct pathogenic pathways with different prognostic implications.</name><description>The precise B cell of origin and molecular pathogenesis of nodal marginal zone lymphoma (NMZL) remain poorly defined. To date, due to the rarity of NMZL, the vast majority of already-published studies have been conducted on a limited number of samples and the technical approach to analyze the immunoglobulin genes was of amplifying rearranged variable region genes with the classical direct sequencing of the PCR products followed by cloning. Here, we studied the B cell Ig heavy-chain repertoires by next-generation sequencing (NGS) in 30 NMZL cases. Most of the cases were mutated (20/28; 71.5%) with homologies to the respective germ line genes ranging from 85 to 97, 83%, whereas 8/28 (28.5%) were unmutated. In addition, our results show that NMZL cases have a biased usage of specific immunogl</description><dates><release>2020-01-01T00:00:00Z</release><publication>2020 Jul</publication><modification>2025-04-18T13:32:01.14Z</modification><creation>2020-07-05T07:05:43Z</creation></dates><accession>S-EPMC7320062</accession><cross_references><pubmed>31802229</pubmed><doi>10.1007/s00428-019-02712-8</doi></cross_references></HashMap>