<HashMap><database>biostudies-literature</database><scores/><additional><submitter>Colavita F</submitter><funding>Ministry of Health</funding><funding>European Commission–Horizon 2020</funding><pagination>ofaa403</pagination><full_dataset_link>https://www.ebi.ac.uk/biostudies/studies/S-EPMC7499768</full_dataset_link><repository>biostudies-literature</repository><omics_type>Unknown</omics_type><volume>7(10)</volume><pubmed_abstract>&lt;h4>Background&lt;/h4>The pathogenesis of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) infection remains unclear. We report the detection of viral RNA from different anatomical districts and the antibody profile in the first 2 COVID-19 cases diagnosed in Italy.&lt;h4>Methods&lt;/h4>We tested for SARS-CoV-2 RNA clinical samples, either respiratory and nonrespiratory (ie, saliva, serum, urine, vomit, rectal, ocular, cutaneous, and cervico-vaginal swabs), longitudinally collected from both patients throughout the hospitalization. Serological analysis was carried out on serial serum samples to evaluate IgM, IgA, IgG, and neutralizing antibody levels.&lt;h4>Results&lt;/h4>SARS-CoV-2 RNA was detected since the early phase of illness, lasting over 2 weeks in both upper and lower respiratory trac</pubmed_abstract><journal>Open forum infectious diseases</journal><pubmed_title>Virological Characterization of the First 2 COVID-19 Patients Diagnosed in Italy: Phylogenetic Analysis, Virus Shedding Profile From Different Body Sites, and Antibody Response Kinetics.</pubmed_title><pmcid>PMC7499768</pmcid><funding_grant_id>COVID 2020 12371675</funding_grant_id><funding_grant_id>COVID-2020-12371817</funding_grant_id><funding_grant_id>101003551</funding_grant_id><funding_grant_id>101003544–CoNVat</funding_grant_id><pubmed_authors>Marchioni L</pubmed_authors><pubmed_authors>Apollonio C</pubmed_authors><pubmed_authors>Ferraioli V</pubmed_authors><pubmed_authors>Benigni M</pubmed_authors><pubmed_authors>Felici L</pubmed_authors><pubmed_authors>Giombini E</pubmed_authors><pubmed_authors>Leone B</pubmed_authors><pubmed_authors>Campioni P</pubmed_authors><pubmed_authors>Casetti R</pubmed_authors><pubmed_authors>Petrosillo N</pubmed_authors><pubmed_authors>Biancone S</pubmed_authors><pubmed_authors>Amendola A</pubmed_authors><pubmed_authors>Pianura E</pubmed_authors><pubmed_authors>Vescovo T</pubmed_authors><pubmed_authors>Noto R</pubmed_authors><pubmed_authors>Passeri V</pubmed_authors><pubmed_authors>Scorzolini L</pubmed_authors><pubmed_authors>Pittalis S</pubmed_authors><pubmed_authors>Garotto G</pubmed_authors><pubmed_authors>Matusali G</pubmed_authors><pubmed_authors>Venditti C</pubmed_authors><pubmed_authors>Aleo L</pubmed_authors><pubmed_authors>Bartolini B</pubmed_authors><pubmed_authors>Ferraro F</pubmed_authors><pubmed_authors>Agrati C</pubmed_authors><pubmed_authors>Vulcano A</pubmed_authors><pubmed_authors>Castilletti C</pubmed_authors><pubmed_authors>Cristofaro M</pubmed_authors><pubmed_authors>Turchi F</pubmed_authors><pubmed_authors>Macchione M</pubmed_authors><pubmed_authors>Rozera G</pubmed_authors><pubmed_authors>Dantimi C</pubmed_authors><pubmed_authors>Palazzolo C</pubmed_authors><pubmed_authors>Petrivelli E</pubmed_authors><pubmed_authors>Carletti F</pubmed_authors><pubmed_authors>Pallini E</pubmed_authors><pubmed_authors>Di Caro A</pubmed_authors><pubmed_authors>Sciamanna R</pubmed_authors><pubmed_authors>Fabeni L</pubmed_authors><pubmed_authors>Rueca M</pubmed_authors><pubmed_authors>Lalle E</pubmed_authors><pubmed_authors>Brega C</pubmed_authors><pubmed_authors>Petruccioli E</pubmed_authors><pubmed_authors>Minosse C</pubmed_authors><pubmed_authors>Mariano A</pubmed_authors><pubmed_authors>Selleri M</pubmed_authors><pubmed_authors>Santagata C</pubmed_authors><pubmed_authors>Giancola ML</pubmed_authors><pubmed_authors>Sanasi F</pubmed_authors><pubmed_authors>Ippolito G</pubmed_authors><pubmed_authors>Selvaggi C</pubmed_authors><pubmed_authors>Fiorentini L</pubmed_authors><pubmed_authors>Proietti C</pubmed_authors><pubmed_authors>Di Filippo S</pubmed_authors><pubmed_authors>Albarello F</pubmed_authors><pubmed_authors>Vincenti D</pubmed_authors><pubmed_authors>Pelliccioni F</pubmed_authors><pubmed_authors>Antonini M</pubmed_authors><pubmed_authors>Marani A</pubmed_authors><pubmed_authors>Di Giuli C</pubmed_authors><pubmed_authors>Branca M</pubmed_authors><pubmed_authors>Truffa S</pubmed_authors><pubmed_authors>Scarcia S</pubmed_authors><pubmed_authors>Sberna G</pubmed_authors><pubmed_authors>INMI COVID-19 Laboratory Team and INMI COVID-19 Study Group</pubmed_authors><pubmed_authors>Murachelli S</pubmed_authors><pubmed_authors>Scognamiglio P</pubmed_authors><pubmed_authors>Gruber CEM</pubmed_authors><pubmed_authors>Sarti S</pubmed_authors><pubmed_authors>D'Abramo A</pubmed_authors><pubmed_authors>Arduini N</pubmed_authors><pubmed_authors>Coen S</pubmed_authors><pubmed_authors>Coppola A</pubmed_authors><pubmed_authors>Meschi S</pubmed_authors><pubmed_authors>Abbate I</pubmed_authors><pubmed_authors>Cannas A</pubmed_authors><pubmed_authors>Toffoletti A</pubmed_authors><pubmed_authors>Bibbo A</pubmed_authors><pubmed_authors>Sabatini R</pubmed_authors><pubmed_authors>Garbuglia AR</pubmed_authors><pubmed_authors>Abbonizio MA</pubmed_authors><pubmed_authors>Cimini E</pubmed_authors><pubmed_authors>Galli P</pubmed_authors><pubmed_authors>Pizzi D</pubmed_authors><pubmed_authors>Ascoli Bartoli T</pubmed_authors><pubmed_authors>Raparelli F</pubmed_authors><pubmed_authors>Frustaci A</pubmed_authors><pubmed_authors>Curiale S</pubmed_authors><pubmed_authors>De Angelis G</pubmed_authors><pubmed_authors>Bordi L</pubmed_authors><pubmed_authors>Forbici F</pubmed_authors><pubmed_authors>Prota G</pubmed_authors><pubmed_authors>Nicastri E</pubmed_authors><pubmed_authors>Khouri D</pubmed_authors><pubmed_authors>Stazi G</pubmed_authors><pubmed_authors>De Angelis A</pubmed_authors><pubmed_authors>Lucia A</pubmed_authors><pubmed_authors>Petrecchia A</pubmed_authors><pubmed_authors>Berno G</pubmed_authors><pubmed_authors>Massimino C</pubmed_authors><pubmed_authors>Caravella I</pubmed_authors><pubmed_authors>D'Arezzo S</pubmed_authors><pubmed_authors>Colavita F</pubmed_authors><pubmed_authors>Bevilacqua N</pubmed_authors><pubmed_authors>Di Lorenzo R</pubmed_authors><pubmed_authors>Vaia F</pubmed_authors><pubmed_authors>Pisciotta M</pubmed_authors><pubmed_authors>Caporale C</pubmed_authors><pubmed_authors>Capobianchi MR</pubmed_authors><pubmed_authors>Marini MC</pubmed_authors><pubmed_authors>Graziano S</pubmed_authors><pubmed_authors>Stellitano C</pubmed_authors><pubmed_authors>Schinina V</pubmed_authors><pubmed_authors>Condello R</pubmed_authors><pubmed_authors>Ciaralli C</pubmed_authors><pubmed_authors>Amadei G</pubmed_authors><pubmed_authors>Lapa D</pubmed_authors><pubmed_authors>Carrara S</pubmed_authors><pubmed_authors>Gori C</pubmed_authors><pubmed_authors>Giansante F</pubmed_authors><pubmed_authors>Sias C</pubmed_authors><pubmed_authors>Montaldo C</pubmed_authors><pubmed_authors>Neri S</pubmed_authors><pubmed_authors>Bordoni V</pubmed_authors><pubmed_authors>Greci MC</pubmed_authors><pubmed_authors>Sacchi A</pubmed_authors><pubmed_authors>Mazzarelli A</pubmed_authors><pubmed_authors>Nisii C</pubmed_authors><pubmed_authors>Biava M</pubmed_authors><pubmed_authors>Ciafrone L</pubmed_authors><pubmed_authors>Zambelli E</pubmed_authors><pubmed_authors>Barbaro R</pubmed_authors><pubmed_authors>Lufrani F</pubmed_authors><pubmed_authors>Lepore L</pubmed_authors><pubmed_authors>Petrone A</pubmed_authors><pubmed_authors>Chiappini R</pubmed_authors><pubmed_authors>Puro V</pubmed_authors><pubmed_authors>Canali M</pubmed_authors><pubmed_authors>Alonzi T</pubmed_authors><pubmed_authors>Marsella P</pubmed_authors><pubmed_authors>Rinonapoli G</pubmed_authors><pubmed_authors>Corpolongo A</pubmed_authors><pubmed_authors>Valli MB</pubmed_authors><pubmed_authors>Lanini S</pubmed_authors><pubmed_authors>Maritti M</pubmed_authors><pubmed_authors>Petroni F</pubmed_authors><pubmed_authors>Di Stefano F</pubmed_authors><pubmed_authors>Vairo F</pubmed_authors><pubmed_authors>Messina F</pubmed_authors></additional><is_claimable>false</is_claimable><name>Virological Characterization of the First 2 COVID-19 Patients Diagnosed in Italy: Phylogenetic Analysis, Virus Shedding Profile From Different Body Sites, and Antibody Response Kinetics.</name><description>&lt;h4>Background&lt;/h4>The pathogenesis of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) infection remains unclear. We report the detection of viral RNA from different anatomical districts and the antibody profile in the first 2 COVID-19 cases diagnosed in Italy.&lt;h4>Methods&lt;/h4>We tested for SARS-CoV-2 RNA clinical samples, either respiratory and nonrespiratory (ie, saliva, serum, urine, vomit, rectal, ocular, cutaneous, and cervico-vaginal swabs), longitudinally collected from both patients throughout the hospitalization. Serological analysis was carried out on serial serum samples to evaluate IgM, IgA, IgG, and neutralizing antibody levels.&lt;h4>Results&lt;/h4>SARS-CoV-2 RNA was detected since the early phase of illness, lasting over 2 weeks in both upper and lower respiratory trac</description><dates><release>2020-01-01T00:00:00Z</release><publication>2020 Oct</publication><modification>2025-04-27T01:16:26.913Z</modification><creation>2021-02-21T06:31:31Z</creation></dates><accession>S-EPMC7499768</accession><cross_references><pubmed>33527081</pubmed><doi>10.1093/ofid/ofaa403</doi></cross_references></HashMap>