{"database":"biostudies-literature","file_versions":[],"scores":null,"additional":{"submitter":["Zhou C"],"funding":["National Natural Science Foundation of China"],"pagination":["11440-11452"],"full_dataset_link":["https://www.ebi.ac.uk/biostudies/studies/S-EPMC7593199"],"repository":["biostudies-literature"],"omics_type":["Unknown"],"volume":["10(20)"],"pubmed_abstract":["The blood pheasant (<i>Ithaginis cruentus</i>), the only species in the genus <i>Ithaginis</i>, lives in an extremely inhospitable high-altitude environment, coping with hypoxia and ultraviolet (UV) radiation. To further investigate the phylogeny of Phasianidae species based on complete genomes and understand the molecular genetic mechanisms of the high-altitude adaptation of the blood pheasant, we de novo assembled and annotated the complete genome of the blood pheasant. The blood pheasant genome size is 1.04 Gb with scaffold N50 of 10.88 Mb. We identified 109.92 Mb (10.62%) repetitive elements, 279,037 perfect microsatellites, and 17,209 protein-coding genes. The phylogenetic tree of Phasianidae based on whole genomes revealed three highly supported major clades with the blood pheasant i"],"journal":["Ecology and evolution"],"pubmed_title":["The draft genome of the blood pheasant (<i>Ithaginis cruentus</i>): Phylogeny and high-altitude adaptation."],"pmcid":["PMC7593199"],"funding_grant_id":["31970395","31702017"],"pubmed_authors":["Liu Y","Zhou C","Yang N","Yue B","Meng Y","Qiao L"],"additional_accession":[]},"is_claimable":false,"name":"The draft genome of the blood pheasant (<i>Ithaginis cruentus</i>): Phylogeny and high-altitude adaptation.","description":"The blood pheasant (<i>Ithaginis cruentus</i>), the only species in the genus <i>Ithaginis</i>, lives in an extremely inhospitable high-altitude environment, coping with hypoxia and ultraviolet (UV) radiation. To further investigate the phylogeny of Phasianidae species based on complete genomes and understand the molecular genetic mechanisms of the high-altitude adaptation of the blood pheasant, we de novo assembled and annotated the complete genome of the blood pheasant. The blood pheasant genome size is 1.04 Gb with scaffold N50 of 10.88 Mb. We identified 109.92 Mb (10.62%) repetitive elements, 279,037 perfect microsatellites, and 17,209 protein-coding genes. The phylogenetic tree of Phasianidae based on whole genomes revealed three highly supported major clades with the blood pheasant i","dates":{"release":"2020-01-01T00:00:00Z","publication":"2020 Oct","modification":"2026-04-30T16:36:50.177Z","creation":"2025-05-29T22:19:22.135Z"},"accession":"S-EPMC7593199","cross_references":{"pubmed":["33144976"],"doi":["10.1002/ece3.6782"]}}