{"database":"biostudies-literature","file_versions":[],"scores":null,"additional":{"omics_type":["Unknown"],"volume":["2(1)"],"submitter":["Sahoo L"],"pubmed_abstract":["Here we report the reconstruction of the catla (<i>Catla catla</i>) complete mitochondrial genome sequence from low depth paired end Illumina sequencing. The genome is of 16,597 bp in size. Similar to other vertebrate mtgenomes, it consists of 13 protein-coding genes, 22 tRNAs, 2 rRNAs and a putative control region. The present mtgenome is 3 bp longer than the earlier reported catla mtgenome from our laboratory. Majority of the mitochondrial genes are encoded by the H-strand. Phylogenetics analysis revealed that <i>Catla catla</i> is closer to <i>Labeo rohita</i> than other labeo species. Present study demonstrated the power of next generation sequencing towards hassle free and rapid sequencing of mitochondrial genomes of non-model organisms."],"journal":["Mitochondrial DNA. Part B, Resources"],"pagination":["155-156"],"full_dataset_link":["https://www.ebi.ac.uk/biostudies/studies/S-EPMC7799541"],"repository":["biostudies-literature"],"pubmed_title":["Rapid recovery of complete mitogenome of Indian major carp, <i>Catla catla</i> from low depth paired end Illumina sequencing."],"pmcid":["PMC7799541"],"pubmed_authors":["Meher PK","Sundaray JK","Das P","Bit A","Murmu K","Sahoo L"],"additional_accession":[]},"is_claimable":false,"name":"Rapid recovery of complete mitogenome of Indian major carp, <i>Catla catla</i> from low depth paired end Illumina sequencing.","description":"Here we report the reconstruction of the catla (<i>Catla catla</i>) complete mitochondrial genome sequence from low depth paired end Illumina sequencing. The genome is of 16,597 bp in size. Similar to other vertebrate mtgenomes, it consists of 13 protein-coding genes, 22 tRNAs, 2 rRNAs and a putative control region. The present mtgenome is 3 bp longer than the earlier reported catla mtgenome from our laboratory. Majority of the mitochondrial genes are encoded by the H-strand. Phylogenetics analysis revealed that <i>Catla catla</i> is closer to <i>Labeo rohita</i> than other labeo species. Present study demonstrated the power of next generation sequencing towards hassle free and rapid sequencing of mitochondrial genomes of non-model organisms.","dates":{"release":"2017-01-01T00:00:00Z","publication":"2017 Mar","modification":"2025-04-19T08:16:07.554Z","creation":"2025-04-19T08:16:07.554Z"},"accession":"S-EPMC7799541","cross_references":{"pubmed":["33473750"],"doi":["10.1080/23802359.2017.1298413"]}}