{"database":"biostudies-literature","file_versions":[],"scores":null,"additional":{"submitter":["Cortese IJ"],"funding":["Proyecto del Instituto Nacional de la Yerba Mate"],"pagination":["e0248274"],"full_dataset_link":["https://www.ebi.ac.uk/biostudies/studies/S-EPMC7954119"],"repository":["biostudies-literature"],"omics_type":["Unknown"],"volume":["16(3)"],"pubmed_abstract":["Plant growth-promoting bacteria (PGPB) are a heterogeneous group of bacteria that can exert beneficial effects on plant growth directly or indirectly by different mechanisms. PGPB-based inoculant formulation has been used to replace chemical fertilizers and pesticides. In our previous studies, two endophytic endospore-forming bacteria identified as Bacillus altitudinis were isolated from roots of Ilex paraguariensis St. Hil. seedlings and selected for their plant growth-promoting (PGP) properties shown in vitro and in vivo. The purposes of this work were to assemble the genomes of B. altitudinis 19RS3 and T5S-T4, using different assemblers available for Windows and Linux and to select the best assembly for each strain. Both genomes were also automatically annotated to detect PGP genes and "],"journal":["PloS one"],"pubmed_title":["De novo genome assembly of Bacillus altitudinis 19RS3 and Bacillus altitudinis T5S-T4, two plant growth-promoting bacteria isolated from Ilex paraguariensis St. Hil. (yerba mate)."],"pmcid":["PMC7954119"],"funding_grant_id":["Res. n° 274/17 (INYM - PRASY)"],"pubmed_authors":["Cortese IJ","Bich GA","Laczeski ME","Castrillo ML","Onetto AL","Zapata PD"],"additional_accession":[]},"is_claimable":false,"name":"De novo genome assembly of Bacillus altitudinis 19RS3 and Bacillus altitudinis T5S-T4, two plant growth-promoting bacteria isolated from Ilex paraguariensis St. Hil. (yerba mate).","description":"Plant growth-promoting bacteria (PGPB) are a heterogeneous group of bacteria that can exert beneficial effects on plant growth directly or indirectly by different mechanisms. PGPB-based inoculant formulation has been used to replace chemical fertilizers and pesticides. In our previous studies, two endophytic endospore-forming bacteria identified as Bacillus altitudinis were isolated from roots of Ilex paraguariensis St. Hil. seedlings and selected for their plant growth-promoting (PGP) properties shown in vitro and in vivo. The purposes of this work were to assemble the genomes of B. altitudinis 19RS3 and T5S-T4, using different assemblers available for Windows and Linux and to select the best assembly for each strain. Both genomes were also automatically annotated to detect PGP genes and ","dates":{"release":"2021-01-01T00:00:00Z","publication":"2021","modification":"2026-05-01T17:34:08.942Z","creation":"2025-04-06T07:58:14.014Z"},"accession":"S-EPMC7954119","cross_references":{"pubmed":["33705487"],"doi":["10.1371/journal.pone.0248274"]}}