{"database":"biostudies-literature","file_versions":[],"scores":null,"additional":{"submitter":["Shimizu KK"],"funding":["University of Zurich Research Priority Program Evolution in Action","JST CREST","German Federal Ministry of Food and Agriculture","Canadian Triticum Applied Genomics research project (CTAG2) funded by Genome Canada","National Agriculture and Food Research Organization (NARO) Vice President Fund","Marie Sklodowska-Curie","Western Grains Research Foundation, Government of Saskatchewan, Saskatchewan Wheat Development Commission, Alberta Wheat Commission, Viterra and Manitoba Wheat and Barley Growers Association","NBRP Genome Information Upgrading Project 2017, AMED","Swiss National Science Foundation","MEXT KAKENHI The Birth of New Plant Species","European Union's Horizon 2020 research and innovation programme","NCCR Evolving Language","Genome Prairie"],"pagination":["8-27"],"full_dataset_link":["https://www.ebi.ac.uk/biostudies/studies/S-EPMC7991897"],"repository":["biostudies-literature"],"omics_type":["Unknown"],"volume":["62(1)"],"pubmed_abstract":["Bread wheat is a major crop that has long been the focus of basic and breeding research. Assembly of its genome has been difficult because of its large size and allohexaploid nature (AABBDD genome). Following the first reported assembly of the genome of the experimental strain Chinese Spring (CS), the 10+ Wheat Genomes Project was launched to produce multiple assemblies of worldwide modern cultivars. The only Asian cultivar in the project is Norin 61, a representative Japanese cultivar adapted to grow across a broad latitudinal range, mostly characterized by a wet climate and a short growing season. Here, we characterize the key aspects of its chromosome-scale genome assembly spanning 15 Gb with a raw scaffold N50 of 22 Mb. Analysis of the repetitive elements identified chromosomal regions"],"journal":["Plant & cell physiology"],"pubmed_title":["De Novo Genome Assembly of the Japanese Wheat Cultivar Norin 61 Highlights Functional Variation in Flowering Time and Fusarium-Resistant Genes in East Asian Genotypes."],"pmcid":["PMC7991897"],"funding_grant_id":["183578","2819103915","51NF40_180888","847585","JP16H06466","182318","JP16H06469","JP16K21727","31003A_182318","JP16H06464","CRSII5_183578","JPMJCR16O3"],"pubmed_authors":["Nakazaki T","Murata K","Mayer KFX","Himmelbach A","Sese J","Wicker T","Kuo T","Stein N","Nasuda S","Mascher M","Spannagl M","Kobayashi F","Handa H","Copetti D","Kawaura K","Nishimura K","Muehlbauer GJ","Hatakeyama M","Pozniak C","Aquino C","Okada M","Shimizu-Inatsugi R","Monat C","Haberer G","Shimizu KK","Ban T","Delorean E","Gutierrez-Gonzalez J","Padmarasu S","Poland J","Tameshige T","Tsuji H","Walkowiak S"],"additional_accession":[]},"is_claimable":false,"name":"De Novo Genome Assembly of the Japanese Wheat Cultivar Norin 61 Highlights Functional Variation in Flowering Time and Fusarium-Resistant Genes in East Asian Genotypes.","description":"Bread wheat is a major crop that has long been the focus of basic and breeding research. Assembly of its genome has been difficult because of its large size and allohexaploid nature (AABBDD genome). Following the first reported assembly of the genome of the experimental strain Chinese Spring (CS), the 10+ Wheat Genomes Project was launched to produce multiple assemblies of worldwide modern cultivars. The only Asian cultivar in the project is Norin 61, a representative Japanese cultivar adapted to grow across a broad latitudinal range, mostly characterized by a wet climate and a short growing season. Here, we characterize the key aspects of its chromosome-scale genome assembly spanning 15 Gb with a raw scaffold N50 of 22 Mb. Analysis of the repetitive elements identified chromosomal regions","dates":{"release":"2021-01-01T00:00:00Z","publication":"2021 Mar","modification":"2026-04-08T00:27:12.565Z","creation":"2022-02-09T13:09:46.826Z"},"accession":"S-EPMC7991897","cross_references":{"pubmed":["33244607"],"doi":["10.1093/pcp/pcaa152"]}}