biostudies-literatureUnknown36Patavardhan SSUniversity Grants CommissionThe dataset presented in this article is associated with the TMT (Tandem mass tag) labeled proteomics of chili pepper plant (<i>Capsicum frutescens</i>) infested by a broad mite (<i>Polyphagotarsonemus latus</i>). Data was captured using a nano liquid chromatography system coupled with high-resolution Orbitrap FusionTribridmass spectrometer. Proteomics data was analyzed using the Proteome Discoverer version 2.4 tool using MASCOT and SequestHT algorithms. We have identified a total of 5,807 proteins supported by 48,555 unique peptides and 1,279,655 peptide-spectrum matches. Individually, 5,186 proteins were detected in healthy leaf samples, 5,193 in infested leaf sample, 5,194 proteins in healthy meristem sample, and 5,196 proteins in infested meristem samples. Datasets obtained from reciprData in brief107095https://www.ebi.ac.uk/biostudies/studies/S-EPMC8142047biostudies-literatureProteome dataset of chili pepper plant (<i>Capsicum frutescens</i>) infested by broad mite <i>(Polyphagotarsonemus latus)</i>.PMC8142047Subba PAwasthi KPrasad TSKSuresh SNajar MANivas SKD'Souza LPatavardhan SSfalseProteome dataset of chili pepper plant (<i>Capsicum frutescens</i>) infested by broad mite <i>(Polyphagotarsonemus latus)</i>.The dataset presented in this article is associated with the TMT (Tandem mass tag) labeled proteomics of chili pepper plant (<i>Capsicum frutescens</i>) infested by a broad mite (<i>Polyphagotarsonemus latus</i>). Data was captured using a nano liquid chromatography system coupled with high-resolution Orbitrap FusionTribridmass spectrometer. Proteomics data was analyzed using the Proteome Discoverer version 2.4 tool using MASCOT and SequestHT algorithms. We have identified a total of 5,807 proteins supported by 48,555 unique peptides and 1,279,655 peptide-spectrum matches. Individually, 5,186 proteins were detected in healthy leaf samples, 5,193 in infested leaf sample, 5,194 proteins in healthy meristem sample, and 5,196 proteins in infested meristem samples. Datasets obtained from recipr2021-01-01T00:00:00Z2021 Jun2026-04-08T08:39:10.265Z2025-04-07T06:57:35.114ZS-EPMC81420473404131510.1016/j.dib.2021.107095