{"database":"biostudies-literature","file_versions":[],"scores":null,"additional":{"submitter":["Xu X"],"funding":["Key Research Program of Frontier Sciences, CAS","Construction of the Registry and Database of Bioparts for Synthetic Biology","National Natural Science Foundation of China","National Key Research and Development Program of China"],"pagination":["809"],"full_dataset_link":["https://www.ebi.ac.uk/biostudies/studies/S-EPMC8539907"],"repository":["biostudies-literature"],"omics_type":["Unknown"],"volume":["7(10)"],"pubmed_abstract":["Endophytic fungi are emerging as attractive producers of natural products with diverse bioactivities and novel structures. However, difficulties in the genetic manipulation of endophytic fungi limit the search of novel secondary metabolites. In this study, we improved the polyethylene glycol (PEG)-mediated protoplast transformation method by introducing the CRISPR/Cas9 system into endophytic fungus <i>Pestalotiopsis fici</i>. Using this approach, we performed genome editing such as site-specific gene insertion, dual-locus mutations, and long DNA fragment deletions in <i>P. fici</i> efficiently. The average efficiency for site-specific gene insertion and two-site gene editing was up to 48.0% and 44.4%, respectively. In addition, the genetic manipulation time with long DNA fragment (5-10 kb)"],"journal":["Journal of fungi (Basel, Switzerland)"],"pubmed_title":["An Optimized and Efficient CRISPR/Cas9 System for the Endophytic Fungus <i>Pestalotiopsis fici</i>."],"pmcid":["PMC8539907"],"funding_grant_id":["31861133004","ZDBS-LY-SM016","ZSYS-016","2020YFA0907801"],"pubmed_authors":["Yin WB","Xu X","Huang R"],"additional_accession":[]},"is_claimable":false,"name":"An Optimized and Efficient CRISPR/Cas9 System for the Endophytic Fungus <i>Pestalotiopsis fici</i>.","description":"Endophytic fungi are emerging as attractive producers of natural products with diverse bioactivities and novel structures. However, difficulties in the genetic manipulation of endophytic fungi limit the search of novel secondary metabolites. In this study, we improved the polyethylene glycol (PEG)-mediated protoplast transformation method by introducing the CRISPR/Cas9 system into endophytic fungus <i>Pestalotiopsis fici</i>. Using this approach, we performed genome editing such as site-specific gene insertion, dual-locus mutations, and long DNA fragment deletions in <i>P. fici</i> efficiently. The average efficiency for site-specific gene insertion and two-site gene editing was up to 48.0% and 44.4%, respectively. In addition, the genetic manipulation time with long DNA fragment (5-10 kb)","dates":{"release":"2021-01-01T00:00:00Z","publication":"2021 Sep","modification":"2026-07-09T11:59:24.034Z","creation":"2026-07-09T11:07:44.585Z"},"accession":"S-EPMC8539907","cross_references":{"pubmed":["34682231"],"doi":["10.3390/jof7100809"]}}