{"database":"biostudies-literature","file_versions":[],"scores":null,"additional":{"omics_type":["Unknown"],"volume":["71(9)"],"submitter":["Pallen MJ"],"funding":["biotechnology and biological sciences research council","medical research council","Biotechnology and Biological Sciences Research Council"],"pubmed_abstract":["The status <i>Candidatus</i> was introduced to bacterial taxonomy in the 1990s to accommodate uncultured taxa defined by analyses of DNA sequences. Here I review the strengths, weaknesses, opportunities and threats (SWOT) associated with the status <i>Candidatus</i> in the light of a quarter century of use, twinned with recent developments in bacterial taxonomy and sequence-based taxonomic discovery. Despite ambiguities as to its scope, philosophical objections to its use and practical problems in implementation, the status <i>Candidatus</i> has now been applied to over 1000 taxa and has been widely adopted by journals and databases. Although lacking priority under the International Code for Nomenclature of Prokaryotes, many <i>Candidatus</i> names have already achieved <i>de facto</i> sta"],"journal":["International journal of systematic and evolutionary microbiology"],"full_dataset_link":["https://www.ebi.ac.uk/biostudies/studies/S-EPMC8549269"],"repository":["biostudies-literature"],"pubmed_title":["The status <i>Candidatus</i> for uncultured taxa of <i>Bacteria</i> and <i>Archaea</i>: SWOT analysis."],"pmcid":["PMC8549269"],"funding_grant_id":["BBS/E/F/000PR10351","MR/T030062/1","BB/R012504/1","BBS/E/F/00044414"],"pubmed_authors":["Pallen MJ"],"additional_accession":[]},"is_claimable":false,"name":"The status <i>Candidatus</i> for uncultured taxa of <i>Bacteria</i> and <i>Archaea</i>: SWOT analysis.","description":"The status <i>Candidatus</i> was introduced to bacterial taxonomy in the 1990s to accommodate uncultured taxa defined by analyses of DNA sequences. Here I review the strengths, weaknesses, opportunities and threats (SWOT) associated with the status <i>Candidatus</i> in the light of a quarter century of use, twinned with recent developments in bacterial taxonomy and sequence-based taxonomic discovery. Despite ambiguities as to its scope, philosophical objections to its use and practical problems in implementation, the status <i>Candidatus</i> has now been applied to over 1000 taxa and has been widely adopted by journals and databases. Although lacking priority under the International Code for Nomenclature of Prokaryotes, many <i>Candidatus</i> names have already achieved <i>de facto</i> sta","dates":{"release":"2021-01-01T00:00:00Z","publication":"2021 Sep","modification":"2025-04-20T01:11:05.462Z","creation":"2025-02-19T01:26:21.599Z"},"accession":"S-EPMC8549269","cross_references":{"pubmed":["34516368"],"doi":["10.1099/ijsem.0.005000"]}}