<HashMap><database>biostudies-literature</database><scores/><additional><submitter>Cox GW</submitter><funding>Gouvernement du Canada | Canadian Institutes of Health Research (CIHR)</funding><funding>Gouvernement du Canada | Canadian Institutes of Health Research</funding><pagination>e0096621</pagination><full_dataset_link>https://www.ebi.ac.uk/biostudies/studies/S-EPMC8597779</full_dataset_link><repository>biostudies-literature</repository><omics_type>Unknown</omics_type><volume>65(12)</volume><pubmed_abstract>We investigated whether the increased prevalence of gentamicin resistance in Salmonella from human infections was related to a similar increased prevalence in isolates from broiler chickens and whether this increase may have been due to coselection from use of lincomycin-spectinomycin in chickens on farms. Whole-genome sequencing was performed on gentamicin-resistant (Gen&lt;sup>r&lt;/sup>) Salmonella isolates from human and chicken sources collected from 2014 to 2017 by the Canadian Integrated Program for Antimicrobial Resistance Surveillance (CIPARS). We determined the genomic relatedness of strains and characterized resistance genes and plasmids. From 2014 to 2017, 247 isolates of Gen&lt;sup>r&lt;/sup> Salmonella were identified by CIPARS: 188 were from humans, and 59 were from chicken sources (26 </pubmed_abstract><journal>Antimicrobial agents and chemotherapy</journal><pubmed_title>A One-Health Genomic Investigation of Gentamicin Resistance in Salmonella from Human and Chicken Sources in Canada, 2014 to 2017.</pubmed_title><pmcid>PMC8597779</pmcid><funding_grant_id>CFC-150770</funding_grant_id><pubmed_authors>Deckert AE</pubmed_authors><pubmed_authors>Bekal S</pubmed_authors><pubmed_authors>Allen V</pubmed_authors><pubmed_authors>Chui L</pubmed_authors><pubmed_authors>Irwin RJ</pubmed_authors><pubmed_authors>Cox GW</pubmed_authors><pubmed_authors>El Bailey S</pubmed_authors><pubmed_authors>Bharat A</pubmed_authors><pubmed_authors>Daignault D</pubmed_authors><pubmed_authors>Zahariadis G</pubmed_authors><pubmed_authors>Haldane D</pubmed_authors><pubmed_authors>Hoang L</pubmed_authors><pubmed_authors>Reid-Smith RJ</pubmed_authors><pubmed_authors>Parmley EJ</pubmed_authors><pubmed_authors>Alexander DC</pubmed_authors><pubmed_authors>Avery BP</pubmed_authors><pubmed_authors>Finley RL</pubmed_authors><pubmed_authors>Minion J</pubmed_authors><pubmed_authors>German GJ</pubmed_authors><pubmed_authors>Mulvey MR</pubmed_authors></additional><is_claimable>false</is_claimable><name>A One-Health Genomic Investigation of Gentamicin Resistance in Salmonella from Human and Chicken Sources in Canada, 2014 to 2017.</name><description>We investigated whether the increased prevalence of gentamicin resistance in Salmonella from human infections was related to a similar increased prevalence in isolates from broiler chickens and whether this increase may have been due to coselection from use of lincomycin-spectinomycin in chickens on farms. Whole-genome sequencing was performed on gentamicin-resistant (Gen&lt;sup>r&lt;/sup>) Salmonella isolates from human and chicken sources collected from 2014 to 2017 by the Canadian Integrated Program for Antimicrobial Resistance Surveillance (CIPARS). We determined the genomic relatedness of strains and characterized resistance genes and plasmids. From 2014 to 2017, 247 isolates of Gen&lt;sup>r&lt;/sup> Salmonella were identified by CIPARS: 188 were from humans, and 59 were from chicken sources (26 </description><dates><release>2021-01-01T00:00:00Z</release><publication>2021 Nov</publication><modification>2026-06-15T03:09:45.579Z</modification><creation>2024-11-15T20:18:42.528Z</creation></dates><accession>S-EPMC8597779</accession><cross_references><pubmed>34570642</pubmed><doi>10.1128/AAC.00966-21</doi><doi>10.1128/aac.00966-21</doi></cross_references></HashMap>