biostudies-literatureUnknown12He WScience, Technology and Innovation Commission of Shenzhen MunicipalityNational Natural Science Foundation of ChinaThe plastid is an essential organelle in autotrophic plant cells, descending from free-living cyanobacteria and acquired by early eukaryotic cells through endosymbiosis roughly one billion years ago. It contained a streamlined genome (plastome) that is uniparentally inherited and non-recombinant, which makes it an ideal tool for resolving the origin and diversity of plant species and populations. In the present study, a large dataset was amassed by <i>de novo</i> assembling plastomes from 295 common wild rice (<i>Oryza rufipogon</i> Griff.) and 1135 Asian cultivated rice (<i>Oryza sativa</i> L.) accessions, supplemented with 34 plastomes from other <i>Oryza</i> species. From this dataset, the phylogenetic relationships and biogeographic history of <i>O. rufipogon</i> and <i>O. sativa</i> wFrontiers in plant science781793https://www.ebi.ac.uk/biostudies/studies/S-EPMC8637288biostudies-literatureThe History and Diversity of Rice Domestication as Resolved From 1464 Complete Plastid Genomes.PMC8637288Wu ZTembrock LRHe WJin DZheng PChen CWang JXiang KfalseThe History and Diversity of Rice Domestication as Resolved From 1464 Complete Plastid Genomes.The plastid is an essential organelle in autotrophic plant cells, descending from free-living cyanobacteria and acquired by early eukaryotic cells through endosymbiosis roughly one billion years ago. It contained a streamlined genome (plastome) that is uniparentally inherited and non-recombinant, which makes it an ideal tool for resolving the origin and diversity of plant species and populations. In the present study, a large dataset was amassed by <i>de novo</i> assembling plastomes from 295 common wild rice (<i>Oryza rufipogon</i> Griff.) and 1135 Asian cultivated rice (<i>Oryza sativa</i> L.) accessions, supplemented with 34 plastomes from other <i>Oryza</i> species. From this dataset, the phylogenetic relationships and biogeographic history of <i>O. rufipogon</i> and <i>O. sativa</i> w2021-01-01T00:00:00Z20212026-05-10T02:50:23.727Z2022-02-11T14:15:19.689ZS-EPMC86372883486818210.3389/fpls.2021.781793