<HashMap><database>biostudies-literature</database><scores/><additional><submitter>Bhardwaj D</submitter><funding>Terry Fox Foundation</funding><funding>Canadian Institute of Health Research</funding><pagination>1247</pagination><full_dataset_link>https://www.ebi.ac.uk/biostudies/studies/S-EPMC8909335</full_dataset_link><repository>biostudies-literature</repository><omics_type>Unknown</omics_type><volume>14(5)</volume><pubmed_abstract>&lt;h4>Background&lt;/h4>This study was conducted to explore the use of quantitative ultrasound (QUS) in predicting recurrence for patients with locally advanced breast cancer (LABC) early during neoadjuvant chemotherapy (NAC).&lt;h4>Methods&lt;/h4>Eighty-three patients with LABC were scanned with 7 MHz ultrasound before starting NAC (week 0) and during treatment (week 4). Spectral parametric maps were generated corresponding to tumor volume. Twenty-four textural features (QUS-Tex&lt;sup>1&lt;/sup>) were determined from parametric maps acquired using grey-level co-occurrence matrices (GLCM) for each patient, which were further processed to generate 64 texture derivatives (QUS-Tex&lt;sup>1&lt;/sup>-Tex&lt;sup>2&lt;/sup>), leading to a total of 95 features from each time point. Analysis was carried out on week 4 data and compared to baseline (week 0) data. ∆Week 4 data was obtained from the difference in QUS parameters, texture features (QUS-Tex&lt;sup>1&lt;/sup>), and texture derivatives (QUS-Tex&lt;sup>1&lt;/sup>-Tex&lt;sup>2&lt;/sup>) of week 4 data and week 0 data. Patients were divided into two groups: recurrence and non-recurrence. Machine learning algorithms using &lt;i>k&lt;/i>-nearest neighbor (k-NN) and support vector machines (SVMs) were used to generate radiomic models. Internal validation was undertaken using leave-one patient out cross-validation method.&lt;h4>Results&lt;/h4>With a median follow up of 69 months (range 7-118 months), 28 patients had disease recurrence. The k-NN classifier was the best performing algorithm at week 4 with sensitivity, specificity, accuracy, and area under curve (AUC) of 87%, 75%, 81%, and 0.83, respectively. The inclusion of texture derivatives (QUS-Tex&lt;sup>1&lt;/sup>-Tex&lt;sup>2&lt;/sup>) in week 4 QUS data analysis led to the improvement of the classifier performances. The AUC increased from 0.70 (0.59 to 0.79, 95% confidence interval) without texture derivatives to 0.83 (0.73 to 0.92) with texture derivatives. The most relevant features separating the two groups were higher-order texture derivatives obtained from scatterer diameter and acoustic concentration-related parametric images.&lt;h4>Conclusions&lt;/h4>This is the first study highlighting the utility of QUS radiomics in the prediction of recurrence during the treatment of LABC. It reflects that the ongoing treatment-related changes can predict clinical outcomes with higher accuracy as compared to pretreatment features alone.</pubmed_abstract><journal>Cancers</journal><pubmed_title>Early Changes in Quantitative Ultrasound Imaging Parameters during Neoadjuvant Chemotherapy to Predict Recurrence in Patients with Locally Advanced Breast Cancer.</pubmed_title><pmcid>PMC8909335</pmcid><funding_grant_id>PJT 159759</funding_grant_id><funding_grant_id>Hecht Foundation (grant number 1083)</funding_grant_id><pubmed_authors>Bhardwaj D</pubmed_authors><pubmed_authors>Eisen A</pubmed_authors><pubmed_authors>DiCenzo D</pubmed_authors><pubmed_authors>Sannachi L</pubmed_authors><pubmed_authors>Brade S</pubmed_authors><pubmed_authors>Trudeau M</pubmed_authors><pubmed_authors>Look-Hong N</pubmed_authors><pubmed_authors>Curpen B</pubmed_authors><pubmed_authors>Gandhi S</pubmed_authors><pubmed_authors>Fatima K</pubmed_authors><pubmed_authors>Czarnota GJ</pubmed_authors><pubmed_authors>Dasgupta A</pubmed_authors><pubmed_authors>Quiaoit K</pubmed_authors><pubmed_authors>Wright F</pubmed_authors></additional><is_claimable>false</is_claimable><name>Early Changes in Quantitative Ultrasound Imaging Parameters during Neoadjuvant Chemotherapy to Predict Recurrence in Patients with Locally Advanced Breast Cancer.</name><description>&lt;h4>Background&lt;/h4>This study was conducted to explore the use of quantitative ultrasound (QUS) in predicting recurrence for patients with locally advanced breast cancer (LABC) early during neoadjuvant chemotherapy (NAC).&lt;h4>Methods&lt;/h4>Eighty-three patients with LABC were scanned with 7 MHz ultrasound before starting NAC (week 0) and during treatment (week 4). Spectral parametric maps were generated corresponding to tumor volume. Twenty-four textural features (QUS-Tex&lt;sup>1&lt;/sup>) were determined from parametric maps acquired using grey-level co-occurrence matrices (GLCM) for each patient, which were further processed to generate 64 texture derivatives (QUS-Tex&lt;sup>1&lt;/sup>-Tex&lt;sup>2&lt;/sup>), leading to a total of 95 features from each time point. Analysis was carried out on week 4 data and compared to baseline (week 0) data. ∆Week 4 data was obtained from the difference in QUS parameters, texture features (QUS-Tex&lt;sup>1&lt;/sup>), and texture derivatives (QUS-Tex&lt;sup>1&lt;/sup>-Tex&lt;sup>2&lt;/sup>) of week 4 data and week 0 data. Patients were divided into two groups: recurrence and non-recurrence. Machine learning algorithms using &lt;i>k&lt;/i>-nearest neighbor (k-NN) and support vector machines (SVMs) were used to generate radiomic models. Internal validation was undertaken using leave-one patient out cross-validation method.&lt;h4>Results&lt;/h4>With a median follow up of 69 months (range 7-118 months), 28 patients had disease recurrence. The k-NN classifier was the best performing algorithm at week 4 with sensitivity, specificity, accuracy, and area under curve (AUC) of 87%, 75%, 81%, and 0.83, respectively. The inclusion of texture derivatives (QUS-Tex&lt;sup>1&lt;/sup>-Tex&lt;sup>2&lt;/sup>) in week 4 QUS data analysis led to the improvement of the classifier performances. The AUC increased from 0.70 (0.59 to 0.79, 95% confidence interval) without texture derivatives to 0.83 (0.73 to 0.92) with texture derivatives. The most relevant features separating the two groups were higher-order texture derivatives obtained from scatterer diameter and acoustic concentration-related parametric images.&lt;h4>Conclusions&lt;/h4>This is the first study highlighting the utility of QUS radiomics in the prediction of recurrence during the treatment of LABC. It reflects that the ongoing treatment-related changes can predict clinical outcomes with higher accuracy as compared to pretreatment features alone.</description><dates><release>2022-01-01T00:00:00Z</release><publication>2022 Feb</publication><modification>2026-04-08T17:25:06.694Z</modification><creation>2025-02-19T05:04:47.657Z</creation></dates><accession>S-EPMC8909335</accession><cross_references><pubmed>35267555</pubmed><doi>10.3390/cancers14051247</doi></cross_references></HashMap>