{"database":"biostudies-literature","file_versions":[],"scores":null,"additional":{"submitter":["Lu Z"],"funding":["Zhejiang Science and Technology Major Program on Agricultural New Variety Breeding","National Nonprofit Institute Research Grant of Chinese Academy of Forestry"],"pagination":["495-497"],"full_dataset_link":["https://www.ebi.ac.uk/biostudies/studies/S-EPMC8933019"],"repository":["biostudies-literature"],"omics_type":["Unknown"],"volume":["7(3)"],"pubmed_abstract":["<i>Toona ciliata</i> var. <i>pubescens</i> is classified as <i>Toona</i> subgenus of Meliaceae family, which belongs to a large deciduous tree species. It is also a kind of precious timber tree species and has a certain medicinal value. Here, the first complete chloroplast genome (cpDNA) sequence of <i>T. ciliata</i> var. <i>pubescens</i> was determined using the Illumina sequencing platform. The cpDNA genome is 159,481 bp in length, containing a large single-copy region (LSC) of 87,176 bp and a small single-copy region (SSC) of 18,381 bp, which were separated by a pair of inverted repeats (IRs) regions of 26,962 bp. The genome contains 138 genes, including 90 protein-coding genes, eight ribosomal RNA genes, and 40 transfer RNA genes. The phylogenetic analysis based on 19 cpDNA genomes showed a close relationship with <i>Toona ciliate</i>."],"journal":["Mitochondrial DNA. Part B, Resources"],"pubmed_title":["Complete chloroplast genome of <i>Toona ciliata</i> Roem. var. <i>pubescens</i> (Franch.) Hand.-Mazz (Meliaceae), 'Chinese mahogany'."],"pmcid":["PMC8933019"],"funding_grant_id":["2021C02070-4","2021C02070-1","CAFYBB2020SZ004"],"pubmed_authors":["Liu J","Fan Y","Dong X","Lu Z","Han X","Dai J","Liu W"],"additional_accession":[]},"is_claimable":false,"name":"Complete chloroplast genome of <i>Toona ciliata</i> Roem. var. <i>pubescens</i> (Franch.) Hand.-Mazz (Meliaceae), 'Chinese mahogany'.","description":"<i>Toona ciliata</i> var. <i>pubescens</i> is classified as <i>Toona</i> subgenus of Meliaceae family, which belongs to a large deciduous tree species. It is also a kind of precious timber tree species and has a certain medicinal value. Here, the first complete chloroplast genome (cpDNA) sequence of <i>T. ciliata</i> var. <i>pubescens</i> was determined using the Illumina sequencing platform. The cpDNA genome is 159,481 bp in length, containing a large single-copy region (LSC) of 87,176 bp and a small single-copy region (SSC) of 18,381 bp, which were separated by a pair of inverted repeats (IRs) regions of 26,962 bp. The genome contains 138 genes, including 90 protein-coding genes, eight ribosomal RNA genes, and 40 transfer RNA genes. The phylogenetic analysis based on 19 cpDNA genomes showed a close relationship with <i>Toona ciliate</i>.","dates":{"release":"2022-01-01T00:00:00Z","publication":"2022","modification":"2025-04-05T11:03:20.445Z","creation":"2025-04-05T11:03:20.445Z"},"accession":"S-EPMC8933019","cross_references":{"pubmed":["35311208"],"doi":["10.1080/23802359.2022.2049987"]}}