<HashMap><database>biostudies-literature</database><scores/><additional><omics_type>Unknown</omics_type><volume>13(4)</volume><submitter>Schmidtke J</submitter><pubmed_abstract>We report upon PanelDesign, a framework to support the design of diagnostic next generation DNA sequencing panels with epidemiological information. Two publicly available resources, namely Genomics England PanelApp and Orphadata, were combined into a single data set to allow genes in a given NGS panel to be ranked according to the frequency of the associated diseases, thereby highlighting potential core genes as defined by the Eurogenetest/ESHG guidelines for diagnostic next generation DNA sequencing. In addition, PanelDesign can be used to evaluate the contribution of different genes to a given disease following ACMG (American College of Medical Genetics) technical standards.</pubmed_abstract><journal>Genes</journal><pagination>684</pagination><full_dataset_link>https://www.ebi.ac.uk/biostudies/studies/S-EPMC9030971</full_dataset_link><repository>biostudies-literature</repository><pubmed_title>PanelDesign: Integrating Epidemiological Information into the Design of Diagnostic NGS Gene Panels.</pubmed_title><pmcid>PMC9030971</pmcid><pubmed_authors>Krawczak M</pubmed_authors><pubmed_authors>Epplen JT</pubmed_authors><pubmed_authors>Schmidtke J</pubmed_authors><pubmed_authors>Glaubitz R</pubmed_authors><pubmed_authors>Philipp P</pubmed_authors><pubmed_authors>Rommel K</pubmed_authors></additional><is_claimable>false</is_claimable><name>PanelDesign: Integrating Epidemiological Information into the Design of Diagnostic NGS Gene Panels.</name><description>We report upon PanelDesign, a framework to support the design of diagnostic next generation DNA sequencing panels with epidemiological information. Two publicly available resources, namely Genomics England PanelApp and Orphadata, were combined into a single data set to allow genes in a given NGS panel to be ranked according to the frequency of the associated diseases, thereby highlighting potential core genes as defined by the Eurogenetest/ESHG guidelines for diagnostic next generation DNA sequencing. In addition, PanelDesign can be used to evaluate the contribution of different genes to a given disease following ACMG (American College of Medical Genetics) technical standards.</description><dates><release>2022-01-01T00:00:00Z</release><publication>2022 Apr</publication><modification>2025-04-04T08:52:52.033Z</modification><creation>2025-04-04T08:52:52.033Z</creation></dates><accession>S-EPMC9030971</accession><cross_references><pubmed>35456490</pubmed><doi>10.3390/genes13040684</doi></cross_references></HashMap>