{"database":"biostudies-literature","file_versions":[],"scores":null,"additional":{"submitter":["Mukherjee P"],"funding":["U.S. Department of Energy","Basic Energy Sciences","Office of Science","NIGMS NIH HHS"],"pagination":["e2107795"],"full_dataset_link":["https://www.ebi.ac.uk/biostudies/studies/S-EPMC9119920"],"repository":["biostudies-literature"],"omics_type":["Unknown"],"volume":["18(20)"],"pubmed_abstract":["Genome engineering of cells using CRISPR/Cas systems has opened new avenues for pharmacological screening and investigating the molecular mechanisms of disease. A critical step in many such studies is the intracellular delivery of the gene editing machinery and the subsequent manipulation of cells. However, these workflows often involve processes such as bulk electroporation for intracellular delivery and fluorescence activated cell sorting for cell isolation that can be harsh to sensitive cell types such as human-induced pluripotent stem cells (hiPSCs). This often leads to poor viability and low overall efficacy, requiring the use of large starting samples. In this work, a fully automated version of the nanofountain probe electroporation (NFP-E) system, a nanopipette-based single-cell ele"],"journal":["Small (Weinheim an der Bergstrasse, Germany)"],"pubmed_title":["Deep Learning-Assisted Automated Single Cell Electroporation Platform for Effective Genetic Manipulation of Hard-to-Transfect Cells."],"pmcid":["PMC9119920"],"funding_grant_id":["R21 GM132709","R43 GM128500"],"pubmed_authors":["Espinosa HD","Patino CA","Mukherjee P","Pathak N","Lemaitre V"],"additional_accession":[]},"is_claimable":false,"name":"Deep Learning-Assisted Automated Single Cell Electroporation Platform for Effective Genetic Manipulation of Hard-to-Transfect Cells.","description":"Genome engineering of cells using CRISPR/Cas systems has opened new avenues for pharmacological screening and investigating the molecular mechanisms of disease. A critical step in many such studies is the intracellular delivery of the gene editing machinery and the subsequent manipulation of cells. However, these workflows often involve processes such as bulk electroporation for intracellular delivery and fluorescence activated cell sorting for cell isolation that can be harsh to sensitive cell types such as human-induced pluripotent stem cells (hiPSCs). This often leads to poor viability and low overall efficacy, requiring the use of large starting samples. In this work, a fully automated version of the nanofountain probe electroporation (NFP-E) system, a nanopipette-based single-cell ele","dates":{"release":"2022-01-01T00:00:00Z","publication":"2022 May","modification":"2025-04-04T09:18:54.369Z","creation":"2025-04-04T09:18:54.369Z"},"accession":"S-EPMC9119920","cross_references":{"pubmed":["35315229"],"doi":["10.1002/smll.202107795"]}}