{"database":"biostudies-literature","file_versions":[],"scores":null,"additional":{"submitter":["Beller NC"],"funding":["National Institute of General Medical Sciences","NIGMS NIH HHS","National Science Foundation"],"pagination":["15990-15999"],"full_dataset_link":["https://www.ebi.ac.uk/biostudies/studies/S-EPMC9248019"],"repository":["biostudies-literature"],"omics_type":["Unknown"],"volume":["93(48)"],"pubmed_abstract":["Three-dimensional cell cultures, or spheroids, are important model systems for cancer research because they recapitulate chemical and phenotypic aspects of in vivo tumors. Spheroids develop radially symmetric chemical gradients, resulting in distinct cellular populations. Stable isotopic labeling by amino acids in cell culture (SILAC) is a well-established approach to quantify protein expression and has previously been used in a pulse-chase format to evaluate temporal changes. In this article, we demonstrate that distinct isotopic signatures can be introduced into discrete spatial cellular populations, effectively tracking proteins to original locations in the spheroid, using a platform that we refer to as spatial SILAC. Spheroid populations were grown with light, medium, and heavy isotopi"],"journal":["Analytical chemistry"],"pubmed_title":["Spatial Stable Isotopic Labeling by Amino Acids in Cell Culture: Pulse-Chase Labeling of Three-Dimensional Multicellular Spheroids for Global Proteome Analysis."],"pmcid":["PMC9248019"],"funding_grant_id":["R01 GM110406","1351595","R01GM110406"],"pubmed_authors":["Lukowski JK","Hummon AB","Ludwig KR","Beller NC"],"additional_accession":[]},"is_claimable":false,"name":"Spatial Stable Isotopic Labeling by Amino Acids in Cell Culture: Pulse-Chase Labeling of Three-Dimensional Multicellular Spheroids for Global Proteome Analysis.","description":"Three-dimensional cell cultures, or spheroids, are important model systems for cancer research because they recapitulate chemical and phenotypic aspects of in vivo tumors. Spheroids develop radially symmetric chemical gradients, resulting in distinct cellular populations. Stable isotopic labeling by amino acids in cell culture (SILAC) is a well-established approach to quantify protein expression and has previously been used in a pulse-chase format to evaluate temporal changes. In this article, we demonstrate that distinct isotopic signatures can be introduced into discrete spatial cellular populations, effectively tracking proteins to original locations in the spheroid, using a platform that we refer to as spatial SILAC. Spheroid populations were grown with light, medium, and heavy isotopi","dates":{"release":"2021-01-01T00:00:00Z","publication":"2021 Dec","modification":"2025-04-05T11:49:17.387Z","creation":"2025-04-05T11:49:17.387Z"},"accession":"S-EPMC9248019","cross_references":{"pubmed":["34813286"],"doi":["10.1021/acs.analchem.1c03461"]}}