<HashMap><database>biostudies-literature</database><scores/><additional><submitter>Elomaa H</submitter><funding>Syöpäsäätiö</funding><funding>NCI NIH HHS</funding><funding>U.S. Department of Health &amp;amp; Human Services | National Institutes of Health</funding><pagination>514-523</pagination><full_dataset_link>https://www.ebi.ac.uk/biostudies/studies/S-EPMC9345858</full_dataset_link><repository>biostudies-literature</repository><omics_type>Unknown</omics_type><volume>127(3)</volume><pubmed_abstract>&lt;h4>Background&lt;/h4>Although high T cell density is a strong favourable prognostic factor in colorectal cancer, the significance of the spatial distribution of T cells is incompletely understood. We aimed to evaluate the prognostic significance of tumour cell-T cell co-localisation and T cell densities.&lt;h4>Methods&lt;/h4>We analysed CD3 and CD8 immunohistochemistry in a study cohort of 983 colorectal cancer patients and a validation cohort (N = 246). Individual immune and tumour cells were identified to calculate T cell densities (to derive T cell density score) and G-cross function values, estimating the likelihood of tumour cells being co-located with T cells within 20 µm radius (to derive T cell proximity score).&lt;h4>Results&lt;/h4>High T cell proximity score associated with longer cancer-specific survival in both the study cohort [adjusted HR for high (vs. low) 0.33, 95% CI 0.20-0.52, P&lt;sub>trend&lt;/sub> &lt; 0.0001] and the validation cohort [adjusted HR for high (vs. low) 0.15, 95% CI 0.05-0.45, P&lt;sub>trend&lt;/sub> &lt; 0.0001] and its prognostic value was independent of T cell density score.&lt;h4>Conclusions&lt;/h4>The spatial point pattern analysis of tumour cell-T cell co-localisation could provide detailed information on colorectal cancer prognosis, supporting the value of spatial measurement of T cell infiltrates as a novel, robust tumour-immune biomarker.</pubmed_abstract><journal>British journal of cancer</journal><pubmed_title>Prognostic significance of spatial and density analysis of T lymphocytes in colorectal cancer.</pubmed_title><pmcid>PMC9345858</pmcid><funding_grant_id>R35 CA197735</funding_grant_id><funding_grant_id>59-5619</funding_grant_id><pubmed_authors>Vayrynen SA</pubmed_authors><pubmed_authors>Helminen O</pubmed_authors><pubmed_authors>Elomaa H</pubmed_authors><pubmed_authors>Wirta EV</pubmed_authors><pubmed_authors>Ahtiainen M</pubmed_authors><pubmed_authors>Vayrynen JP</pubmed_authors><pubmed_authors>Seppala TT</pubmed_authors><pubmed_authors>Ogino S</pubmed_authors><pubmed_authors>Bohm J</pubmed_authors><pubmed_authors>Makinen MJ</pubmed_authors><pubmed_authors>Kuopio T</pubmed_authors><pubmed_authors>Friman M</pubmed_authors><pubmed_authors>Mecklin JP</pubmed_authors><pubmed_authors>Nowak JA</pubmed_authors></additional><is_claimable>false</is_claimable><name>Prognostic significance of spatial and density analysis of T lymphocytes in colorectal cancer.</name><description>&lt;h4>Background&lt;/h4>Although high T cell density is a strong favourable prognostic factor in colorectal cancer, the significance of the spatial distribution of T cells is incompletely understood. We aimed to evaluate the prognostic significance of tumour cell-T cell co-localisation and T cell densities.&lt;h4>Methods&lt;/h4>We analysed CD3 and CD8 immunohistochemistry in a study cohort of 983 colorectal cancer patients and a validation cohort (N = 246). Individual immune and tumour cells were identified to calculate T cell densities (to derive T cell density score) and G-cross function values, estimating the likelihood of tumour cells being co-located with T cells within 20 µm radius (to derive T cell proximity score).&lt;h4>Results&lt;/h4>High T cell proximity score associated with longer cancer-specific survival in both the study cohort [adjusted HR for high (vs. low) 0.33, 95% CI 0.20-0.52, P&lt;sub>trend&lt;/sub> &lt; 0.0001] and the validation cohort [adjusted HR for high (vs. low) 0.15, 95% CI 0.05-0.45, P&lt;sub>trend&lt;/sub> &lt; 0.0001] and its prognostic value was independent of T cell density score.&lt;h4>Conclusions&lt;/h4>The spatial point pattern analysis of tumour cell-T cell co-localisation could provide detailed information on colorectal cancer prognosis, supporting the value of spatial measurement of T cell infiltrates as a novel, robust tumour-immune biomarker.</description><dates><release>2022-01-01T00:00:00Z</release><publication>2022 Aug</publication><modification>2024-11-15T22:36:51.191Z</modification><creation>2024-11-15T22:36:51.191Z</creation></dates><accession>S-EPMC9345858</accession><cross_references><pubmed>35449453</pubmed><doi>10.1038/s41416-022-01822-6</doi></cross_references></HashMap>