{"database":"biostudies-literature","file_versions":[],"scores":null,"additional":{"submitter":["Wang H"],"funding":["Chun Hui Program of Ministry of Education of China","Natural Science Foundation of Qinghai Provincial Science and Technology Department, China"],"pagination":["1477-1478"],"full_dataset_link":["https://www.ebi.ac.uk/biostudies/studies/S-EPMC9377260"],"repository":["biostudies-literature"],"omics_type":["Unknown"],"volume":["7(8)"],"pubmed_abstract":["<i>Gentianopsis paludosa</i> (Hook. f.) Ma (Gentianaceae) is one of the genuine medicinal materials in Qinghai-Tibet Plateau, China. Here we report the first chloroplast (cp) genome of <i>G. paludosa</i> using Illumina NovaSeq 6000 platform. The length of its complete cp genome is 151,568 bp, containing four sub-regions; a large single copy region (LSC) of 82,834 bp and a small single copy region (SSC) of 17,928 bp are separated by a pair of inverted repeat regions (IRs) of 25,403bp. The complete cp genome of <i>G. paludosa</i> contains 130 genes, including 85 protein-coding genes, 37 tRNA genes, and 8 rRNA genes. The overall GC content of the cp genome is 37.8%. The phylogenetic analysis, based on 23 cp genomes, suggested that <i>G. paludosa</i> is closely related to <i>G. grandis</i> (H."],"journal":["Mitochondrial DNA. Part B, Resources"],"pubmed_title":["The complete chloroplast genome of a medical herb, <i>Gentianopsis paludosa</i> (Hook. f.) Ma (Gentianaceae), from Qinghai-Tibet Plateau in China."],"pmcid":["PMC9377260"],"funding_grant_id":["Z2019070","2017-ZJ-742"],"pubmed_authors":["Li J","Liu L","Zhang J","Wang H","Zeng Y","Zhang R"],"additional_accession":[]},"is_claimable":false,"name":"The complete chloroplast genome of a medical herb, <i>Gentianopsis paludosa</i> (Hook. f.) Ma (Gentianaceae), from Qinghai-Tibet Plateau in China.","description":"<i>Gentianopsis paludosa</i> (Hook. f.) Ma (Gentianaceae) is one of the genuine medicinal materials in Qinghai-Tibet Plateau, China. Here we report the first chloroplast (cp) genome of <i>G. paludosa</i> using Illumina NovaSeq 6000 platform. The length of its complete cp genome is 151,568 bp, containing four sub-regions; a large single copy region (LSC) of 82,834 bp and a small single copy region (SSC) of 17,928 bp are separated by a pair of inverted repeat regions (IRs) of 25,403bp. The complete cp genome of <i>G. paludosa</i> contains 130 genes, including 85 protein-coding genes, 37 tRNA genes, and 8 rRNA genes. The overall GC content of the cp genome is 37.8%. The phylogenetic analysis, based on 23 cp genomes, suggested that <i>G. paludosa</i> is closely related to <i>G. grandis</i> (H.","dates":{"release":"2022-01-01T00:00:00Z","publication":"2022","modification":"2025-04-05T12:11:04.714Z","creation":"2025-02-19T01:29:09.436Z"},"accession":"S-EPMC9377260","cross_references":{"pubmed":["35979391"],"doi":["10.1080/23802359.2021.1915198"]}}