<HashMap><database>biostudies-literature</database><scores/><additional><submitter>Natalini A</submitter><funding>Consiglio Nazionale delle Ricerche</funding><funding>Italian Minister of Research and University (MIUR)</funding><funding>The Francis Crick Institute</funding><pagination>1171-1175</pagination><full_dataset_link>https://www.ebi.ac.uk/biostudies/studies/S-EPMC9543383</full_dataset_link><repository>biostudies-literature</repository><omics_type>Unknown</omics_type><volume>99(12)</volume><pubmed_abstract>A multicolor flow cytometry panel was designed and optimized to define the following nine mouse T cell subsets: Treg (CD3&lt;sup>+&lt;/sup> CD4&lt;sup>+&lt;/sup> CD8&lt;sup>-&lt;/sup> FoxP3&lt;sup>+&lt;/sup> ), CD4&lt;sup>+&lt;/sup> T naïve (CD3&lt;sup>+&lt;/sup> CD4&lt;sup>+&lt;/sup> CD8&lt;sup>-&lt;/sup> FoxP3&lt;sup>-&lt;/sup> CD44&lt;sup>int/low&lt;/sup> CD62L&lt;sup>+&lt;/sup> ), CD4&lt;sup>+&lt;/sup> T central memory (CD3&lt;sup>+&lt;/sup> CD4&lt;sup>+&lt;/sup> CD8&lt;sup>-&lt;/sup> FoxP3&lt;sup>-&lt;/sup> CD44&lt;sup>high&lt;/sup> CD62L&lt;sup>+&lt;/sup> ), CD4&lt;sup>+&lt;/sup> T effector memory (CD3&lt;sup>+&lt;/sup&gt; CD4&lt;sup>+&lt;/sup> CD8&lt;sup>-&lt;/sup> FoxP3&lt;sup>-&lt;/sup> CD44&lt;sup>high&lt;/sup> CD62L&lt;sup>-&lt;/sup> ), CD4&lt;sup>+&lt;/sup> T EMRA (CD3&lt;sup>+&lt;/sup> CD4&lt;sup>+&lt;/sup> CD8&lt;sup>-&lt;/sup> FoxP3&lt;sup>-&lt;/sup> CD44&lt;sup>int/low&lt;/sup> CD62L&lt;sup>-&lt;/sup> ), CD8&lt;sup>+&lt;/sup> T naïve (CD3&lt;sup>+&lt;/sup> CD8&lt;sup>+&lt;/sup> CD4&lt;sup>-&lt;/sup> CD44&lt;sup>int/low&lt;/sup> CD62L&lt;sup>+&lt;/sup> ), CD8&lt;sup>+&lt;/sup> T central memory (CD3&lt;sup>+&lt;/sup> CD8&lt;sup>+&lt;/sup> CD4&lt;sup>-&lt;/sup> CD44&lt;sup>high&lt;/sup> CD62L&lt;sup>+&lt;/sup> ), CD8&lt;sup>+&lt;/sup> T effector memory (CD3&lt;sup>+&lt;/sup> CD8&lt;sup>+&lt;/sup> CD4&lt;sup>-&lt;/sup> CD44&lt;sup>high&lt;/sup> CD62L&lt;sup>-&lt;/sup> ), and CD8&lt;sup>+&lt;/sup> T EMRA (CD3&lt;sup>+&lt;/sup> CD8&lt;sup>+&lt;/sup> CD4&lt;sup>-&lt;/sup> CD44&lt;sup>int/low&lt;/sup> CD62L&lt;sup>-&lt;/sup> ). In each T cell subset, a dual staining for Ki-67 expression and DNA content was employed to distinguish the following cell cycle phases: G&lt;sub>0&lt;/sub> (Ki67&lt;sup>-&lt;/sup> , with 2n DNA), G&lt;sub>1&lt;/sub> (Ki67&lt;sup>+&lt;/sup> , with 2n DNA), and S-G&lt;sub>2&lt;/sub> /M (Ki67&lt;sup>+&lt;/sup> , with 2n &lt; DNA ≤ 4n). This panel was established for the analysis of mouse (C57BL/6J) spleen.</pubmed_abstract><journal>Cytometry. Part A : the journal of the International Society for Analytical Cytology</journal><pubmed_title>OMIP-079: Cell cycle of CD4&lt;sup>+&lt;/sup> and CD8&lt;sup>+&lt;/sup> naive/memory T cell subsets, and of Treg cells from mouse spleen.</pubmed_title><pmcid>PMC9543383</pmcid><funding_grant_id>STM‐2019</funding_grant_id><funding_grant_id>10093</funding_grant_id><funding_grant_id>2017K55HLC</funding_grant_id><funding_grant_id>STM-2019</funding_grant_id><funding_grant_id>10729</funding_grant_id><funding_grant_id>10794</funding_grant_id><pubmed_authors>Natalini A</pubmed_authors><pubmed_authors>Di Rosa F</pubmed_authors><pubmed_authors>Santoni A</pubmed_authors><pubmed_authors>Simonetti S</pubmed_authors><pubmed_authors>Hayday A</pubmed_authors><pubmed_authors>Antonangeli F</pubmed_authors><pubmed_authors>Munoz-Ruiz M</pubmed_authors><pubmed_authors>Peruzzi G</pubmed_authors><pubmed_authors>Favaretto G</pubmed_authors></additional><is_claimable>false</is_claimable><name>OMIP-079: Cell cycle of CD4&lt;sup>+&lt;/sup> and CD8&lt;sup>+&lt;/sup> naive/memory T cell subsets, and of Treg cells from mouse spleen.</name><description>A multicolor flow cytometry panel was designed and optimized to define the following nine mouse T cell subsets: Treg (CD3&lt;sup>+&lt;/sup> CD4&lt;sup>+&lt;/sup> CD8&lt;sup>-&lt;/sup> FoxP3&lt;sup>+&lt;/sup> ), CD4&lt;sup>+&lt;/sup> T naïve (CD3&lt;sup>+&lt;/sup> CD4&lt;sup>+&lt;/sup> CD8&lt;sup>-&lt;/sup> FoxP3&lt;sup>-&lt;/sup> CD44&lt;sup>int/low&lt;/sup> CD62L&lt;sup>+&lt;/sup> ), CD4&lt;sup>+&lt;/sup> T central memory (CD3&lt;sup>+&lt;/sup> CD4&lt;sup>+&lt;/sup> CD8&lt;sup>-&lt;/sup> FoxP3&lt;sup>-&lt;/sup> CD44&lt;sup>high&lt;/sup> CD62L&lt;sup>+&lt;/sup> ), CD4&lt;sup>+&lt;/sup> T effector memory (CD3&lt;sup>+&lt;/sup&gt; CD4&lt;sup>+&lt;/sup> CD8&lt;sup>-&lt;/sup> FoxP3&lt;sup>-&lt;/sup> CD44&lt;sup>high&lt;/sup> CD62L&lt;sup>-&lt;/sup> ), CD4&lt;sup>+&lt;/sup> T EMRA (CD3&lt;sup>+&lt;/sup> CD4&lt;sup>+&lt;/sup> CD8&lt;sup>-&lt;/sup> FoxP3&lt;sup>-&lt;/sup> CD44&lt;sup>int/low&lt;/sup> CD62L&lt;sup>-&lt;/sup> ), CD8&lt;sup>+&lt;/sup> T naïve (CD3&lt;sup>+&lt;/sup> CD8&lt;sup>+&lt;/sup> CD4&lt;sup>-&lt;/sup> CD44&lt;sup>int/low&lt;/sup> CD62L&lt;sup>+&lt;/sup> ), CD8&lt;sup>+&lt;/sup> T central memory (CD3&lt;sup>+&lt;/sup> CD8&lt;sup>+&lt;/sup> CD4&lt;sup>-&lt;/sup> CD44&lt;sup>high&lt;/sup> CD62L&lt;sup>+&lt;/sup> ), CD8&lt;sup>+&lt;/sup> T effector memory (CD3&lt;sup>+&lt;/sup> CD8&lt;sup>+&lt;/sup> CD4&lt;sup>-&lt;/sup> CD44&lt;sup>high&lt;/sup> CD62L&lt;sup>-&lt;/sup> ), and CD8&lt;sup>+&lt;/sup> T EMRA (CD3&lt;sup>+&lt;/sup> CD8&lt;sup>+&lt;/sup> CD4&lt;sup>-&lt;/sup> CD44&lt;sup>int/low&lt;/sup> CD62L&lt;sup>-&lt;/sup> ). In each T cell subset, a dual staining for Ki-67 expression and DNA content was employed to distinguish the following cell cycle phases: G&lt;sub>0&lt;/sub> (Ki67&lt;sup>-&lt;/sup> , with 2n DNA), G&lt;sub>1&lt;/sub> (Ki67&lt;sup>+&lt;/sup> , with 2n DNA), and S-G&lt;sub>2&lt;/sub> /M (Ki67&lt;sup>+&lt;/sup> , with 2n &lt; DNA ≤ 4n). This panel was established for the analysis of mouse (C57BL/6J) spleen.</description><dates><release>2021-01-01T00:00:00Z</release><publication>2021 Dec</publication><modification>2025-04-05T20:11:06.586Z</modification><creation>2025-04-05T20:11:06.586Z</creation></dates><accession>S-EPMC9543383</accession><cross_references><pubmed>34668313</pubmed><doi>10.1002/cyto.a.24509</doi></cross_references></HashMap>