<HashMap><database>biostudies-literature</database><scores/><additional><submitter>Jansen IE</submitter><funding>European Research Council</funding><funding>EU Joint Programme – Neurodegenerative Disease Research</funding><funding>NIA NIH HHS</funding><funding>Dutch Research Council (NWO)</funding><funding>ZonMw</funding><pagination>821-842</pagination><full_dataset_link>https://www.ebi.ac.uk/biostudies/studies/S-EPMC9547780</full_dataset_link><repository>biostudies-literature</repository><omics_type>Unknown</omics_type><volume>144(5)</volume><pubmed_abstract>Amyloid-beta 42 (Aβ42) and phosphorylated tau (pTau) levels in cerebrospinal fluid (CSF) reflect core features of the pathogenesis of Alzheimer's disease (AD) more directly than clinical diagnosis. Initiated by the European Alzheimer &amp; Dementia Biobank (EADB), the largest collaborative effort on genetics underlying CSF biomarkers was established, including 31 cohorts with a total of 13,116 individuals (discovery n = 8074; replication n = 5042 individuals). Besides the APOE locus, novel associations with two other well-established AD risk loci were observed; CR1 was shown a locus for Aβ42 and BIN1 for pTau. GMNC and C16orf95 were further identified as loci for pTau, of which the latter is novel. Clustering methods exploring the influence of all known AD risk loci on the CSF protein levels, revealed 4 biological categories suggesting multiple Aβ42 and pTau related biological pathways involved in the etiology of AD. In functional follow-up analyses, GMNC and C16orf95 both associated with lateral ventricular volume, implying an overlap in genetic etiology for tau levels and brain ventricular volume.</pubmed_abstract><journal>Acta neuropathologica</journal><pubmed_title>Genome-wide meta-analysis for Alzheimer's disease cerebrospinal fluid biomarkers.</pubmed_title><pmcid>PMC9547780</pmcid><funding_grant_id>024.004.012</funding_grant_id><funding_grant_id>R01 AG015801</funding_grant_id><funding_grant_id>73305095007</funding_grant_id><funding_grant_id>RF1 AG058501</funding_grant_id><funding_grant_id>733051061</funding_grant_id><funding_grant_id>834057</funding_grant_id><funding_grant_id>RF1 AG053303</funding_grant_id><funding_grant_id>R01 AG058501</funding_grant_id><funding_grant_id>720931</funding_grant_id><funding_grant_id>R01 AG044546</funding_grant_id><funding_grant_id>R01 AG068398</funding_grant_id><funding_grant_id>P30 AG066444</funding_grant_id><funding_grant_id>U01 AG058922</funding_grant_id><funding_grant_id>681712</funding_grant_id><funding_grant_id>R01 AG064877</funding_grant_id><funding_grant_id>R01 AG064614</funding_grant_id><funding_grant_id>P01 AG003991</funding_grant_id><funding_grant_id>European Alzheimer DNA BioBank, EADB</funding_grant_id><pubmed_authors>Frolich L</pubmed_authors><pubmed_authors>Scheltens P</pubmed_authors><pubmed_authors>van der Flier W</pubmed_authors><pubmed_authors>Tesi N</pubmed_authors><pubmed_authors>Gomez-Fonseca D</pubmed_authors><pubmed_authors>Kucukali F</pubmed_authors><pubmed_authors>Jansen IE</pubmed_authors><pubmed_authors>Van Dongen J</pubmed_authors><pubmed_authors>Scherbaum N</pubmed_authors><pubmed_authors>Dalmasso MC</pubmed_authors><pubmed_authors>Athanasiu L</pubmed_authors><pubmed_authors>Laske C</pubmed_authors><pubmed_authors>Popp J</pubmed_authors><pubmed_authors>Sung YJ</pubmed_authors><pubmed_authors>Shadrin A</pubmed_authors><pubmed_authors>Kern S</pubmed_authors><pubmed_authors>Mol MO</pubmed_authors><pubmed_authors>Waern M</pubmed_authors><pubmed_authors>Posthuma D</pubmed_authors><pubmed_authors>Cruchaga C</pubmed_authors><pubmed_authors>de Munain AL</pubmed_authors><pubmed_authors>Bahrami S</pubmed_authors><pubmed_authors>Clarimon J</pubmed_authors><pubmed_authors>Soininen H</pubmed_authors><pubmed_authors>Herukka SK</pubmed_authors><pubmed_authors>Lleo A</pubmed_authors><pubmed_authors>Biessels GJ</pubmed_authors><pubmed_authors>Fladby T</pubmed_authors><pubmed_authors>Gobom J</pubmed_authors><pubmed_authors>Lopez-Garcia S</pubmed_authors><pubmed_authors>Leinonen V</pubmed_authors><pubmed_authors>Moreno F</pubmed_authors><pubmed_authors>Engelborghs S</pubmed_authors><pubmed_authors>Kleineidam L</pubmed_authors><pubmed_authors>Sanchez-Juan P</pubmed_authors><pubmed_authors>Vidal JS</pubmed_authors><pubmed_authors>Boland A</pubmed_authors><pubmed_authors>Haapasalo A</pubmed_authors><pubmed_authors>Pasquier F</pubmed_authors><pubmed_authors>Schneider A</pubmed_authors><pubmed_authors>Ramirez A</pubmed_authors><pubmed_authors>Dufouil C</pubmed_authors><pubmed_authors>Hampel H</pubmed_authors><pubmed_authors>Zettergren A</pubmed_authors><pubmed_authors>Wightman DP</pubmed_authors><pubmed_authors>Selbæk G</pubmed_authors><pubmed_authors>Alcolea D</pubmed_authors><pubmed_authors>Garcia-Gonzalez P</pubmed_authors><pubmed_authors>Vogelgsang J</pubmed_authors><pubmed_authors>Belbin O</pubmed_authors><pubmed_authors>de Rojas I</pubmed_authors><pubmed_authors>Bertram L</pubmed_authors><pubmed_authors>Lambert JC</pubmed_authors><pubmed_authors>Vandenberghe R</pubmed_authors><pubmed_authors>Zulaica M</pubmed_authors><pubmed_authors>Mishra A</pubmed_authors><pubmed_authors>Quintela I</pubmed_authors><pubmed_authors>de Deyn PP</pubmed_authors><pubmed_authors>Ruiz A</pubmed_authors><pubmed_authors>Visser PJ</pubmed_authors><pubmed_authors>Teunissen CE</pubmed_authors><pubmed_authors>Van Broeckhoven C</pubmed_authors><pubmed_authors>Andrade V</pubmed_authors><pubmed_authors>Orellana A</pubmed_authors><pubmed_authors>Pijnenburg YAL</pubmed_authors><pubmed_authors>Nothen MM</pubmed_authors><pubmed_authors>Ramakers I</pubmed_authors><pubmed_authors>Zetterberg H</pubmed_authors><pubmed_authors>Amouyel P</pubmed_authors><pubmed_authors>Helisalmi S</pubmed_authors><pubmed_authors>Knapskog AB</pubmed_authors><pubmed_authors>Wittens MMJ</pubmed_authors><pubmed_authors>Andreassen OA</pubmed_authors><pubmed_authors>Holstege H</pubmed_authors><pubmed_authors>Hernandez I</pubmed_authors><pubmed_authors>van Swieten JC</pubmed_authors><pubmed_authors>Kornhuber J</pubmed_authors><pubmed_authors>Bellenguez C</pubmed_authors><pubmed_authors>Peters O</pubmed_authors><pubmed_authors>Puerta R</pubmed_authors><pubmed_authors>Diehl-Schmid J</pubmed_authors><pubmed_authors>Grimmer T</pubmed_authors><pubmed_authors>Lage C</pubmed_authors><pubmed_authors>Tarraga L</pubmed_authors><pubmed_authors>Jessen F</pubmed_authors><pubmed_authors>Wagner M</pubmed_authors><pubmed_authors>Bjerke M</pubmed_authors><pubmed_authors>Carracedo A</pubmed_authors><pubmed_authors>Wiltfang J</pubmed_authors><pubmed_authors>EADB consortium</pubmed_authors><pubmed_authors>Bailly H</pubmed_authors><pubmed_authors>Teipel S</pubmed_authors><pubmed_authors>Debette S</pubmed_authors><pubmed_authors>van Duijn CM</pubmed_authors><pubmed_authors>Fortea J</pubmed_authors><pubmed_authors>Lewczuk P</pubmed_authors><pubmed_authors>Selnes P</pubmed_authors><pubmed_authors>Cervera-Carles L</pubmed_authors><pubmed_authors>Deleuze JF</pubmed_authors><pubmed_authors>Boada M</pubmed_authors><pubmed_authors>Hausner L</pubmed_authors><pubmed_authors>Heilmann-Heimbach S</pubmed_authors><pubmed_authors>Hiltunen M</pubmed_authors><pubmed_authors>Palhaugen L</pubmed_authors><pubmed_authors>Blennow K</pubmed_authors><pubmed_authors>Duzel E</pubmed_authors><pubmed_authors>Sleegers K</pubmed_authors><pubmed_authors>Koivisto AM</pubmed_authors><pubmed_authors>Goldhardt O</pubmed_authors><pubmed_authors>Marquie M</pubmed_authors><pubmed_authors>Jarholm J</pubmed_authors><pubmed_authors>Hanon O</pubmed_authors><pubmed_authors>Schmid M</pubmed_authors><pubmed_authors>Blesa R</pubmed_authors><pubmed_authors>Perneczky R</pubmed_authors><pubmed_authors>Papma JM</pubmed_authors><pubmed_authors>Djurovic S</pubmed_authors><pubmed_authors>Buerger K</pubmed_authors><pubmed_authors>Nicolas G</pubmed_authors><pubmed_authors>Vromen EM</pubmed_authors><pubmed_authors>Priller J</pubmed_authors><pubmed_authors>Ingelsson M</pubmed_authors><pubmed_authors>van der Lee SJ</pubmed_authors><pubmed_authors>Alvarez I</pubmed_authors><pubmed_authors>Chene G</pubmed_authors><pubmed_authors>Claassen JAHR</pubmed_authors><pubmed_authors>Garcia-Martinez M</pubmed_authors><pubmed_authors>Maier W</pubmed_authors><pubmed_authors>Bergh S</pubmed_authors><pubmed_authors>Montrreal L</pubmed_authors><pubmed_authors>Grenier-Boley B</pubmed_authors><pubmed_authors>Pastor P</pubmed_authors><pubmed_authors>Alegret M</pubmed_authors><pubmed_authors>Duron E</pubmed_authors><pubmed_authors>Giegling I</pubmed_authors><pubmed_authors>Ali M</pubmed_authors><pubmed_authors>Rujescu D</pubmed_authors><pubmed_authors>Dols-Icardo O</pubmed_authors><pubmed_authors>Heneka MT</pubmed_authors><pubmed_authors>Kuulasmaa T</pubmed_authors><pubmed_authors>Pozueta A</pubmed_authors><pubmed_authors>Rodriguez-Rodriguez E</pubmed_authors><pubmed_authors>Skoog I</pubmed_authors><pubmed_authors>Tsolaki M</pubmed_authors><pubmed_authors>Moreno-Grau S</pubmed_authors><pubmed_authors>Saltvedt I</pubmed_authors><pubmed_authors>Tijms B</pubmed_authors><pubmed_authors>GR@ACE study group</pubmed_authors></additional><is_claimable>false</is_claimable><name>Genome-wide meta-analysis for Alzheimer's disease cerebrospinal fluid biomarkers.</name><description>Amyloid-beta 42 (Aβ42) and phosphorylated tau (pTau) levels in cerebrospinal fluid (CSF) reflect core features of the pathogenesis of Alzheimer's disease (AD) more directly than clinical diagnosis. Initiated by the European Alzheimer &amp; Dementia Biobank (EADB), the largest collaborative effort on genetics underlying CSF biomarkers was established, including 31 cohorts with a total of 13,116 individuals (discovery n = 8074; replication n = 5042 individuals). Besides the APOE locus, novel associations with two other well-established AD risk loci were observed; CR1 was shown a locus for Aβ42 and BIN1 for pTau. GMNC and C16orf95 were further identified as loci for pTau, of which the latter is novel. Clustering methods exploring the influence of all known AD risk loci on the CSF protein levels, revealed 4 biological categories suggesting multiple Aβ42 and pTau related biological pathways involved in the etiology of AD. In functional follow-up analyses, GMNC and C16orf95 both associated with lateral ventricular volume, implying an overlap in genetic etiology for tau levels and brain ventricular volume.</description><dates><release>2022-01-01T00:00:00Z</release><publication>2022 Nov</publication><modification>2026-06-01T02:11:03.08Z</modification><creation>2025-02-19T01:28:35.178Z</creation></dates><accession>S-EPMC9547780</accession><cross_references><pubmed>36066633</pubmed><doi>10.1007/s00401-022-02454-z</doi></cross_references></HashMap>