{"database":"biostudies-literature","file_versions":[],"scores":null,"additional":{"submitter":["Sa P"],"funding":["Fundação para a Ciência e a Tecnologia"],"pagination":["1003069"],"full_dataset_link":["https://www.ebi.ac.uk/biostudies/studies/S-EPMC9639768"],"repository":["biostudies-literature"],"omics_type":["Unknown"],"volume":["13"],"pubmed_abstract":["Angola, in the western coast of Africa, has been through dramatic social events that have led to the near-disappearance of native swine populations, and the recent introduction of European exotic breeds has also contributed to the erosion of this native swine repertoire. In an effort to investigate the genetic basis of native pigs in Angola (ANG) we have generated whole genomes from animals of a remote local pig population in Huambo province, which we have compared with 78 genomes of European and Asian pig breeds as well as European and Asian wild boars that are currently in public domain. Analyses of population structure showed that ANG pigs grouped within the European cluster and were clearly separated from Asian pig breeds. Pairwise <i>F</i> <sub><i>ST</i></sub> ranged from 0.14 to 0.26"],"journal":["Frontiers in genetics"],"pubmed_title":["Lost pigs of Angola: Whole genome sequencing reveals unique regions of selection with emphasis on metabolism and feed efficiency."],"pmcid":["PMC9639768"],"funding_grant_id":["UIDB/00276/2020 LA/P/0059/2020 - AL4AnimalS 2021.02058.CEECIND"],"pubmed_authors":["Santos D","Chiaia H","Gama LT","Leitao A","Sa P","Cordeiro JM","Amaral AJ"],"additional_accession":[]},"is_claimable":false,"name":"Lost pigs of Angola: Whole genome sequencing reveals unique regions of selection with emphasis on metabolism and feed efficiency.","description":"Angola, in the western coast of Africa, has been through dramatic social events that have led to the near-disappearance of native swine populations, and the recent introduction of European exotic breeds has also contributed to the erosion of this native swine repertoire. In an effort to investigate the genetic basis of native pigs in Angola (ANG) we have generated whole genomes from animals of a remote local pig population in Huambo province, which we have compared with 78 genomes of European and Asian pig breeds as well as European and Asian wild boars that are currently in public domain. Analyses of population structure showed that ANG pigs grouped within the European cluster and were clearly separated from Asian pig breeds. Pairwise <i>F</i> <sub><i>ST</i></sub> ranged from 0.14 to 0.26","dates":{"release":"2022-01-01T00:00:00Z","publication":"2022","modification":"2026-04-08T12:05:48.182Z","creation":"2024-11-13T18:51:59.512Z"},"accession":"S-EPMC9639768","cross_references":{"pubmed":["36353101"],"doi":["10.3389/fgene.2022.1003069"]}}