{"database":"biostudies-literature","file_versions":[],"scores":null,"additional":{"submitter":["Li C"],"funding":["“Blue Granary” Project for Scientific and Technological Innovation of China"],"pagination":["gigabyte32"],"full_dataset_link":["https://www.ebi.ac.uk/biostudies/studies/S-EPMC9650296"],"repository":["biostudies-literature"],"omics_type":["Unknown"],"volume":["2021"],"pubmed_abstract":["The Bicolor Angelfish, <i>Centropyge bicolor</i>, is a tropical coral reef fish. It is named for its striking two-color body. However, a lack of high-quality genomic data means little is known about the genome of this species. Here, we present a chromosome-level <i>C. bicolor</i> genome constructed using Hi-C data. The assembled genome is 650 Mbp in size, with a scaffold N50 value of 4.4 Mbp, and a contig N50 value of 114 Kbp. Protein-coding genes numbering 21,774 were annotated. Our analysis will help others to choose the most appropriate <i>de novo</i> genome sequencing strategy based on resources and target applications. To the best of our knowledge, this is the first chromosome-level genome for the Pomacanthidae family, which might contribute to further studies exploring coral reef fis"],"journal":["GigaByte (Hong Kong, China)"],"pubmed_title":["Bicolor angelfish (<i>Centropyge bicolor</i>) provides the first chromosome-level genome of the Pomacanthidae family."],"pmcid":["PMC9650296"],"funding_grant_id":["2018YFD0900301-05"],"pubmed_authors":["Li C","Pan S","Shao L","Wang C","Zhang H","Liu Q","Zhang M","Liu S","Zhang R","Yang X","Xue W","Fan G","Mao C"],"additional_accession":[]},"is_claimable":false,"name":"Bicolor angelfish (<i>Centropyge bicolor</i>) provides the first chromosome-level genome of the Pomacanthidae family.","description":"The Bicolor Angelfish, <i>Centropyge bicolor</i>, is a tropical coral reef fish. It is named for its striking two-color body. However, a lack of high-quality genomic data means little is known about the genome of this species. Here, we present a chromosome-level <i>C. bicolor</i> genome constructed using Hi-C data. The assembled genome is 650 Mbp in size, with a scaffold N50 value of 4.4 Mbp, and a contig N50 value of 114 Kbp. Protein-coding genes numbering 21,774 were annotated. Our analysis will help others to choose the most appropriate <i>de novo</i> genome sequencing strategy based on resources and target applications. To the best of our knowledge, this is the first chromosome-level genome for the Pomacanthidae family, which might contribute to further studies exploring coral reef fis","dates":{"release":"2021-01-01T00:00:00Z","publication":"2021","modification":"2025-04-04T14:17:09.003Z","creation":"2025-02-19T02:23:54.189Z"},"accession":"S-EPMC9650296","cross_references":{"pubmed":["36824335"],"doi":["10.46471/gigabyte.32"]}}