{"database":"biostudies-literature","file_versions":[],"scores":null,"additional":{"submitter":["Qin H"],"funding":["Fundamental Research Funds for the Central Universities","Heilongjiang Touyan Innovation Team Program","the National Natural Science Foundation of China"],"pagination":["13102"],"full_dataset_link":["https://www.ebi.ac.uk/biostudies/studies/S-EPMC9656282"],"repository":["biostudies-literature"],"omics_type":["Unknown"],"volume":["23(21)"],"pubmed_abstract":["In Brassicaceae, the papillary cells of the stigma are the primary site of the self-incompatibility (SI) responses. SI preserves the genetic diversity by selectively rejecting irrelevant or incompatible pollen, thus promoting cross fertilization and species fitness. Mechanisms that regulate SI responses in <i>Brassica</i> have been studied mainly on the mature stigma that often undermines how stigma papillary cells attain the state of SI during development. To understand this, we integrated PacBio SMRT-seq with Illumina RNA-seq to construct a de novo full-length transcriptomic database for different stages of stigma development in ornamental kale. A total of 48,800 non-redundant transcripts, 31,269 novel transcripts, 24,015 genes, 13,390 alternative splicing, 22,389 simple sequence repeats"],"journal":["International journal of molecular sciences"],"pubmed_title":["Fatty Acid Biosynthesis Pathways Are Downregulated during Stigma Development and Are Critical during Self-Incompatible Responses in Ornamental Kale."],"pmcid":["PMC9656282"],"funding_grant_id":["(Tree Genetics and Breeding Innovation Team)","2572022AW66","31870300"],"pubmed_authors":["Li H","Yao K","Abhinandan K","Zhao R","Qin H","Shi J","Xun B","Lan X","Li M","Wu Y"],"additional_accession":[]},"is_claimable":false,"name":"Fatty Acid Biosynthesis Pathways Are Downregulated during Stigma Development and Are Critical during Self-Incompatible Responses in Ornamental Kale.","description":"In Brassicaceae, the papillary cells of the stigma are the primary site of the self-incompatibility (SI) responses. SI preserves the genetic diversity by selectively rejecting irrelevant or incompatible pollen, thus promoting cross fertilization and species fitness. Mechanisms that regulate SI responses in <i>Brassica</i> have been studied mainly on the mature stigma that often undermines how stigma papillary cells attain the state of SI during development. To understand this, we integrated PacBio SMRT-seq with Illumina RNA-seq to construct a de novo full-length transcriptomic database for different stages of stigma development in ornamental kale. A total of 48,800 non-redundant transcripts, 31,269 novel transcripts, 24,015 genes, 13,390 alternative splicing, 22,389 simple sequence repeats","dates":{"release":"2022-01-01T00:00:00Z","publication":"2022 Oct","modification":"2025-04-22T12:31:21.933Z","creation":"2024-11-10T02:35:01.388Z"},"accession":"S-EPMC9656282","cross_references":{"pubmed":["36361887"],"doi":["10.3390/ijms232113102"]}}