{"database":"biostudies-literature","file_versions":[],"scores":null,"additional":{"omics_type":["Unknown"],"volume":["117"],"submitter":["Andrade MS"],"pubmed_abstract":["<h4>Background</h4>In Brazil, the yellow fever virus (YFV) is maintained in a sylvatic cycle involving wild mosquitoes and non-human primates (NHPs). The virus is endemic to the Amazon region; however, waves of epidemic expansion reaching other Brazilian states sporadically occur, eventually causing spillovers to humans.<h4>Objectives</h4>To report a surveillance effort that led to the first confirmation of YFV in NHPs in the state of Minas Gerais (MG), Southeast region, in 2021.<h4>Methods</h4>A surveillance network was created, encompassing the technology of smartphone applications and coordinated actions of several research institutions and health services to monitor and investigate NHP epizootics.<h4>Findings</h4>When alerts were spread through the network, samples from NHPs were collected and YFV infection confirmed by reverse transcription-quantitative polymerase chain reaction (RT-qPCR) and genome sequencing at an interval of only 10 days. Near-complete genomes were generated using the Nanopore MinION sequencer. Phylogenetic analysis indicated that viral genomes were related to the South American genotype I, clustering with a genome detected in the Amazon region (state of Pará) in 2017, named YFVPA/MG sub-lineage. Fast YFV confirmation potentialised vaccination campaigns.<h4>Main conclusions</h4>A new YFV introduction was detected in MG 6 years after the beginning of the major outbreak reported in the state (2015-2018). The YFV strain was not related to the sub-lineages previously reported in MG. No human cases have been reported, suggesting the importance of coordinated surveillance of NHPs using available technologies and supporting laboratories to ensure a quick response and implementation of contingency measures to avoid YFV spillover to humans."],"journal":["Memorias do Instituto Oswaldo Cruz"],"pagination":["e220127"],"full_dataset_link":["https://www.ebi.ac.uk/biostudies/studies/S-EPMC9718055"],"repository":["biostudies-literature"],"pubmed_title":["Fast surveillance response reveals the introduction of a new yellow fever virus sub-lineage in 2021, in Minas Gerais, Brazil."],"pmcid":["PMC9718055"],"pubmed_authors":["Andrade MS","Fonseca VS","Lamounier LO","Aquino-Teixeira SM","Albuquerque GR","Oliveira CH","Pereira MA","Muller NFD","Franco AC","Seva ADP","Goncalves-Dos-Santos ME","Santos ED","Campos AAS","Abreu FVS","Chaves DCC","Ribeiro BM","Cardoso JDC","Magalhaes FM","Bernal-Valle S","Oliveira RS","Temponi AOD","Menezes GG","Roehe PM","Simonini-Teixeira D","Almeida MAB","Campos FS","Mares-Guia MA","Romano APM"],"additional_accession":[]},"is_claimable":false,"name":"Fast surveillance response reveals the introduction of a new yellow fever virus sub-lineage in 2021, in Minas Gerais, Brazil.","description":"<h4>Background</h4>In Brazil, the yellow fever virus (YFV) is maintained in a sylvatic cycle involving wild mosquitoes and non-human primates (NHPs). The virus is endemic to the Amazon region; however, waves of epidemic expansion reaching other Brazilian states sporadically occur, eventually causing spillovers to humans.<h4>Objectives</h4>To report a surveillance effort that led to the first confirmation of YFV in NHPs in the state of Minas Gerais (MG), Southeast region, in 2021.<h4>Methods</h4>A surveillance network was created, encompassing the technology of smartphone applications and coordinated actions of several research institutions and health services to monitor and investigate NHP epizootics.<h4>Findings</h4>When alerts were spread through the network, samples from NHPs were collected and YFV infection confirmed by reverse transcription-quantitative polymerase chain reaction (RT-qPCR) and genome sequencing at an interval of only 10 days. Near-complete genomes were generated using the Nanopore MinION sequencer. Phylogenetic analysis indicated that viral genomes were related to the South American genotype I, clustering with a genome detected in the Amazon region (state of Pará) in 2017, named YFVPA/MG sub-lineage. Fast YFV confirmation potentialised vaccination campaigns.<h4>Main conclusions</h4>A new YFV introduction was detected in MG 6 years after the beginning of the major outbreak reported in the state (2015-2018). The YFV strain was not related to the sub-lineages previously reported in MG. No human cases have been reported, suggesting the importance of coordinated surveillance of NHPs using available technologies and supporting laboratories to ensure a quick response and implementation of contingency measures to avoid YFV spillover to humans.","dates":{"release":"2022-01-01T00:00:00Z","publication":"2022","modification":"2026-06-12T09:50:22.62Z","creation":"2025-02-19T03:01:06.839Z"},"accession":"S-EPMC9718055","cross_references":{"pubmed":["36478156"],"doi":["10.1590/0074-02760220127"]}}