<HashMap><database>biostudies-literature</database><scores/><additional><omics_type>Unknown</omics_type><volume>80</volume><submitter>Ruthven M</submitter><pubmed_abstract>&lt;h4>Objective&lt;/h4>Dynamic magnetic resonance (MR) imaging enables visualisation of articulators during speech. There is growing interest in quantifying articulator motion in two-dimensional MR images of the vocal tract, to better understand speech production and potentially inform patient management decisions. Image registration is an established way to achieve this quantification. Recently, segmentation-informed deformable registration frameworks have been developed and have achieved state-of-the-art accuracy. This work aims to adapt such a framework and optimise it for estimating displacement fields between dynamic two-dimensional MR images of the vocal tract during speech.&lt;h4>Methods&lt;/h4>A deep-learning-based registration framework was developed and compared with current state-of-the-art registration methods and frameworks (two traditional methods and three deep-learning-based frameworks, two of which are segmentation informed). The accuracy of the methods and frameworks was evaluated using the Dice coefficient (DSC), average surface distance (ASD) and a metric based on velopharyngeal closure. The metric evaluated if the fields captured a clinically relevant and quantifiable aspect of articulator motion.&lt;h4>Results&lt;/h4>The segmentation-informed frameworks achieved higher DSCs and lower ASDs and captured more velopharyngeal closures than the traditional methods and the framework that was not segmentation informed. All segmentation-informed frameworks achieved similar DSCs and ASDs. However, the proposed framework captured the most velopharyngeal closures.&lt;h4>Conclusions&lt;/h4>A framework was successfully developed and found to more accurately estimate articulator motion than five current state-of-the-art methods and frameworks.&lt;h4>Significance&lt;/h4>The first deep-learning-based framework specifically for registering dynamic two-dimensional MR images of the vocal tract during speech has been developed and evaluated.</pubmed_abstract><journal>Biomedical signal processing and control</journal><pagination>104290</pagination><full_dataset_link>https://www.ebi.ac.uk/biostudies/studies/S-EPMC9746295</full_dataset_link><repository>biostudies-literature</repository><pubmed_title>A segmentation-informed deep learning framework to register dynamic two-dimensional magnetic resonance images of the vocal tract during speech.</pubmed_title><pmcid>PMC9746295</pmcid><pubmed_authors>King AP</pubmed_authors><pubmed_authors>Miquel ME</pubmed_authors><pubmed_authors>Ruthven M</pubmed_authors></additional><is_claimable>false</is_claimable><name>A segmentation-informed deep learning framework to register dynamic two-dimensional magnetic resonance images of the vocal tract during speech.</name><description>&lt;h4>Objective&lt;/h4>Dynamic magnetic resonance (MR) imaging enables visualisation of articulators during speech. There is growing interest in quantifying articulator motion in two-dimensional MR images of the vocal tract, to better understand speech production and potentially inform patient management decisions. Image registration is an established way to achieve this quantification. Recently, segmentation-informed deformable registration frameworks have been developed and have achieved state-of-the-art accuracy. This work aims to adapt such a framework and optimise it for estimating displacement fields between dynamic two-dimensional MR images of the vocal tract during speech.&lt;h4>Methods&lt;/h4>A deep-learning-based registration framework was developed and compared with current state-of-the-art registration methods and frameworks (two traditional methods and three deep-learning-based frameworks, two of which are segmentation informed). The accuracy of the methods and frameworks was evaluated using the Dice coefficient (DSC), average surface distance (ASD) and a metric based on velopharyngeal closure. The metric evaluated if the fields captured a clinically relevant and quantifiable aspect of articulator motion.&lt;h4>Results&lt;/h4>The segmentation-informed frameworks achieved higher DSCs and lower ASDs and captured more velopharyngeal closures than the traditional methods and the framework that was not segmentation informed. All segmentation-informed frameworks achieved similar DSCs and ASDs. However, the proposed framework captured the most velopharyngeal closures.&lt;h4>Conclusions&lt;/h4>A framework was successfully developed and found to more accurately estimate articulator motion than five current state-of-the-art methods and frameworks.&lt;h4>Significance&lt;/h4>The first deep-learning-based framework specifically for registering dynamic two-dimensional MR images of the vocal tract during speech has been developed and evaluated.</description><dates><release>2023-01-01T00:00:00Z</release><publication>2023 Feb</publication><modification>2025-04-05T13:30:22.688Z</modification><creation>2025-04-05T13:30:22.688Z</creation></dates><accession>S-EPMC9746295</accession><cross_references><pubmed>36743699</pubmed><doi>10.1016/j.bspc.2022.104290</doi></cross_references></HashMap>