<HashMap><database>biostudies-literature</database><scores/><additional><submitter>Gomez-Linan C</submitter><funding>Spanish Ministry of Science and Innovation</funding><funding>Spanish National Research Council</funding><funding>La Caixa Foundation-Health Research 2020 Call</funding><pagination>12251-12265</pagination><full_dataset_link>https://www.ebi.ac.uk/biostudies/studies/S-EPMC9757043</full_dataset_link><repository>biostudies-literature</repository><omics_type>Unknown</omics_type><volume>50(21)</volume><pubmed_abstract>In-depth analysis of the transcriptomes of several model organisms has revealed that genomes are pervasively transcribed, giving rise to an abundance of non-canonical and mainly antisense RNA polymerase II-derived transcripts that are produced from almost any genomic context. Pervasive RNAs are degraded by surveillance mechanisms, but the repertoire of proteins that control the fate of these non-productive transcripts is still incomplete. Trypanosomes are single-celled eukaryotes that show constitutive RNA polymerase II transcription and in which initiation and termination of transcription occur at a limited number of sites per chromosome. It is not known whether pervasive transcription exists in organisms with unregulated RNA polymerase II activity, and which factors could be involved in </pubmed_abstract><journal>Nucleic acids research</journal><pubmed_title>The RNA-binding protein RBP33 dampens non-productive transcription in trypanosomes.</pubmed_title><pmcid>PMC9757043</pmcid><funding_grant_id>201920E114</funding_grant_id><funding_grant_id>PID2019-111109RB-I00</funding_grant_id><funding_grant_id>HR20-00635</funding_grant_id><pubmed_authors>Gomez-Linan C</pubmed_authors><pubmed_authors>Ceballos-Perez G</pubmed_authors><pubmed_authors>Fernandez-Moya SM</pubmed_authors><pubmed_authors>Estevez AM</pubmed_authors><pubmed_authors>Gomez-Diaz E</pubmed_authors></additional><is_claimable>false</is_claimable><name>The RNA-binding protein RBP33 dampens non-productive transcription in trypanosomes.</name><description>In-depth analysis of the transcriptomes of several model organisms has revealed that genomes are pervasively transcribed, giving rise to an abundance of non-canonical and mainly antisense RNA polymerase II-derived transcripts that are produced from almost any genomic context. Pervasive RNAs are degraded by surveillance mechanisms, but the repertoire of proteins that control the fate of these non-productive transcripts is still incomplete. Trypanosomes are single-celled eukaryotes that show constitutive RNA polymerase II transcription and in which initiation and termination of transcription occur at a limited number of sites per chromosome. It is not known whether pervasive transcription exists in organisms with unregulated RNA polymerase II activity, and which factors could be involved in </description><dates><release>2022-01-01T00:00:00Z</release><publication>2022 Nov</publication><modification>2026-05-08T03:15:02.98Z</modification><creation>2025-06-01T01:56:23.003Z</creation></dates><accession>S-EPMC9757043</accession><cross_references><pubmed>36454008</pubmed><doi>10.1093/nar/gkac1123</doi></cross_references></HashMap>