{"database":"biostudies-literature","file_versions":[],"scores":null,"additional":{"omics_type":["Unknown"],"volume":["13(12)"],"submitter":["Yan X"],"pubmed_abstract":["Homeodomain-leucine zipper (HD-ZIP) transcription factors are one of the plant-specific gene families involved in plant growth and response to adverse environmental conditions. However, little information is available on the HD-ZIP gene family in watermelon. In this study, forty <i>ClHDZs</i> were systemically identified in the watermelon genome, which were subsequently divided into four distinctive subfamilies (I-IV) based on the phylogenetic topology. HD-ZIP members in the same subfamily generally shared similar gene structures and conserved motifs. Syntenic analyses revealed that segmental duplications mainly contributed to the expansion of the watermelon HD-ZIP family, especially in subfamilies I and IV. HD-ZIP III was considered the most conserved subfamily during the evolutionary his"],"journal":["Genes"],"pagination":["2242"],"full_dataset_link":["https://www.ebi.ac.uk/biostudies/studies/S-EPMC9777774"],"repository":["biostudies-literature"],"pubmed_title":["The HD-ZIP Gene Family in Watermelon: Genome-Wide Identification and Expression Analysis under Abiotic Stresses."],"pmcid":["PMC9777774"],"pubmed_authors":["Pan X","Li X","Luan F","Yang J","Li J","Zhang X","Wei C","Si F","Chen X","Yan X","Yue Z"],"additional_accession":[]},"is_claimable":false,"name":"The HD-ZIP Gene Family in Watermelon: Genome-Wide Identification and Expression Analysis under Abiotic Stresses.","description":"Homeodomain-leucine zipper (HD-ZIP) transcription factors are one of the plant-specific gene families involved in plant growth and response to adverse environmental conditions. However, little information is available on the HD-ZIP gene family in watermelon. In this study, forty <i>ClHDZs</i> were systemically identified in the watermelon genome, which were subsequently divided into four distinctive subfamilies (I-IV) based on the phylogenetic topology. HD-ZIP members in the same subfamily generally shared similar gene structures and conserved motifs. Syntenic analyses revealed that segmental duplications mainly contributed to the expansion of the watermelon HD-ZIP family, especially in subfamilies I and IV. HD-ZIP III was considered the most conserved subfamily during the evolutionary his","dates":{"release":"2022-01-01T00:00:00Z","publication":"2022 Nov","modification":"2025-04-18T16:34:00.736Z","creation":"2025-04-07T03:49:59.151Z"},"accession":"S-EPMC9777774","cross_references":{"pubmed":["36553509"],"doi":["10.3390/genes13122242"]}}