{"database":"biostudies-literature","file_versions":[],"scores":null,"additional":{"submitter":["Bao J"],"funding":["National Natural Science Foundation of China"],"pagination":["1238"],"full_dataset_link":["https://www.ebi.ac.uk/biostudies/studies/S-EPMC9785059"],"repository":["biostudies-literature"],"omics_type":["Unknown"],"volume":["8(12)"],"pubmed_abstract":["(1) Background: <i>Pyricularia oryzae,</i> the causal agent of rice blast disease, is one of the major rice pathogens. The complex population structure of <i>P. oryzae</i> facilitates the rapid virulence variations, which make the blast disease a serious challenge for global food security. There is a large body of existing genomics research on <i>P. oryzae</i>, however the population structure at the pan-genome level is not clear, and the mechanism of genetic divergence and virulence variations of different sub-populations is also unknown. (2) Methods: Based on the genome data published in the NCBI, we constructed a pan-genome database of <i>P. oryzae</i>, which consisted of 156 strains (117 isolated from rice and 39 isolated from other hosts). (3) Results: The pan-genome contained a total"],"journal":["Journal of fungi (Basel, Switzerland)"],"pubmed_title":["Pan-Genomics Reveals a New Variation Pattern of Secreted Proteins in <i>Pyricularia oryzae</i>."],"pmcid":["PMC9785059"],"funding_grant_id":["U1805232","32001976","32270078","32172365"],"pubmed_authors":["Zheng H","Bao J","Chen M","Xie J","Chen X","Chen S","Tang W","Wang Z"],"additional_accession":[]},"is_claimable":false,"name":"Pan-Genomics Reveals a New Variation Pattern of Secreted Proteins in <i>Pyricularia oryzae</i>.","description":"(1) Background: <i>Pyricularia oryzae,</i> the causal agent of rice blast disease, is one of the major rice pathogens. The complex population structure of <i>P. oryzae</i> facilitates the rapid virulence variations, which make the blast disease a serious challenge for global food security. There is a large body of existing genomics research on <i>P. oryzae</i>, however the population structure at the pan-genome level is not clear, and the mechanism of genetic divergence and virulence variations of different sub-populations is also unknown. (2) Methods: Based on the genome data published in the NCBI, we constructed a pan-genome database of <i>P. oryzae</i>, which consisted of 156 strains (117 isolated from rice and 39 isolated from other hosts). (3) Results: The pan-genome contained a total","dates":{"release":"2022-01-01T00:00:00Z","publication":"2022 Nov","modification":"2026-04-08T11:04:33.29Z","creation":"2024-11-09T20:33:43.44Z"},"accession":"S-EPMC9785059","cross_references":{"pubmed":["36547571"],"doi":["10.3390/jof8121238"]}}