{"database":"biostudies-literature","file_versions":[],"scores":null,"additional":{"submitter":["Tan F"],"funding":["Science and Technology Planning Project of Guangdong Province","National Natural Science Foundation of China","Natural Science Foundation of Guangdong Province for Distinguished Young Scholars, China"],"pagination":["57-60"],"full_dataset_link":["https://www.ebi.ac.uk/biostudies/studies/S-EPMC9817124"],"repository":["biostudies-literature"],"omics_type":["Unknown"],"volume":["8(1)"],"pubmed_abstract":["<i>Firmiana hainanensis</i> Kosterm. is a commercially valuable endemic tree species in China and has long been considered a globally vulnerable species. We assembled and characterized the complete chloroplast genome of this species by using Illumina pair-end sequencing data. The total chloroplast genome size was 161,559 bp, including two inverted repeats (IRs) of 25,612 bp, separated by a large single copy (LSC) and a small single copy (SSC) regions of 90,057 and 20,277 bp, respectively. A total of 130 genes were identified, including 85 protein-coding genes, 37 <i>tRNA</i>, and eight <i>rRNA</i> genes. Phylogenetic analysis showed that <i>F. hainanensis</i> was the most basal species in the genus <i>Firmiana</i>. The chloroplast genome of this species will provide a theoretical basis to "],"journal":["Mitochondrial DNA. Part B, Resources"],"pubmed_title":["Characterization of the complete chloroplast genome of <i>Firmiana hainanensis</i> (Malvaceae), an endemic and vulnerable tree species of China."],"pmcid":["PMC9817124"],"funding_grant_id":["2022A1515012015","2017A030313189","2019B030301007","31200466"],"pubmed_authors":["Banerjee AK","Feng H","Feng Y","Deng J","Tan F","Shu Y","Wang J"],"additional_accession":[]},"is_claimable":false,"name":"Characterization of the complete chloroplast genome of <i>Firmiana hainanensis</i> (Malvaceae), an endemic and vulnerable tree species of China.","description":"<i>Firmiana hainanensis</i> Kosterm. is a commercially valuable endemic tree species in China and has long been considered a globally vulnerable species. We assembled and characterized the complete chloroplast genome of this species by using Illumina pair-end sequencing data. The total chloroplast genome size was 161,559 bp, including two inverted repeats (IRs) of 25,612 bp, separated by a large single copy (LSC) and a small single copy (SSC) regions of 90,057 and 20,277 bp, respectively. A total of 130 genes were identified, including 85 protein-coding genes, 37 <i>tRNA</i>, and eight <i>rRNA</i> genes. Phylogenetic analysis showed that <i>F. hainanensis</i> was the most basal species in the genus <i>Firmiana</i>. The chloroplast genome of this species will provide a theoretical basis to ","dates":{"release":"2023-01-01T00:00:00Z","publication":"2023","modification":"2026-05-27T21:03:27.605Z","creation":"2025-02-18T22:34:17.249Z"},"accession":"S-EPMC9817124","cross_references":{"pubmed":["36620311"],"doi":["10.1080/23802359.2022.2160669"]}}