<HashMap><database>biostudies-literature</database><scores/><additional><submitter>Alexander JL</submitter><funding>NIHR Exeter Clinical Research Facility</funding><funding>Medical Research Council</funding><funding>National Institute for Health Research (NIHR)</funding><funding>NIHR Imperial Biomedical Research Centre</funding><funding>Imperial College London</funding><funding>National Institute for Health and Care Research</funding><funding>Imperial College Healthcare NHS Trust</funding><funding>Biotechnology and Biological Sciences Research Council</funding><pagination>104430</pagination><full_dataset_link>https://www.ebi.ac.uk/biostudies/studies/S-EPMC9831064</full_dataset_link><repository>biostudies-literature</repository><omics_type>Unknown</omics_type><volume>88</volume><pubmed_abstract>&lt;h4>Background&lt;/h4>Patients with inflammatory bowel disease (IBD) treated with anti-TNF therapy exhibit attenuated humoral immune responses to vaccination against SARS-CoV-2. The gut microbiota and its functional metabolic output, which are perturbed in IBD, play an important role in shaping host immune responses. We explored whether the gut microbiota and metabolome could explain variation in anti-SARS-CoV-2 vaccination responses in immunosuppressed IBD patients.&lt;h4>Methods&lt;/h4>Faecal and serum samples were prospectively collected from infliximab-treated patients with IBD in the CLARITY-IBD study undergoing vaccination against SARS-CoV-2. Antibody responses were measured following two doses of either ChAdOx1 nCoV-19 or BNT162b2 vaccine. Patients were classified as having responses above o</pubmed_abstract><journal>EBioMedicine</journal><pubmed_title>The gut microbiota and metabolome are associated with diminished COVID-19 vaccine-induced antibody responses in immunosuppressed inflammatory bowel disease patients.</pubmed_title><pmcid>PMC9831064</pmcid><funding_grant_id>MC_PC_12025</funding_grant_id><funding_grant_id>MR/S034919/1</funding_grant_id><funding_grant_id>CL-2019-21-502</funding_grant_id><funding_grant_id>BBS/E/T/000PR9819</funding_grant_id><funding_grant_id>NIHR300543</funding_grant_id><pubmed_authors>Prabhudev H</pubmed_authors><pubmed_authors>Saifuddin A</pubmed_authors><pubmed_authors>Lin S</pubmed_authors><pubmed_authors>Ahmad T</pubmed_authors><pubmed_authors>Sebastian S</pubmed_authors><pubmed_authors>Teare JP</pubmed_authors><pubmed_authors>Liu Z</pubmed_authors><pubmed_authors>Hart A</pubmed_authors><pubmed_authors>Alexander JL</pubmed_authors><pubmed_authors>Kennedy NA</pubmed_authors><pubmed_authors>Korcsmaros T</pubmed_authors><pubmed_authors>Sands C</pubmed_authors><pubmed_authors>Lees CW</pubmed_authors><pubmed_authors>Mullish BH</pubmed_authors><pubmed_authors>Powell N</pubmed_authors><pubmed_authors>Marchesi JR</pubmed_authors><pubmed_authors>Lewis M</pubmed_authors><pubmed_authors>Danckert NP</pubmed_authors><pubmed_authors>Goodhand JR</pubmed_authors><pubmed_authors>Olbei ML</pubmed_authors><pubmed_authors>Ibraheim H</pubmed_authors><pubmed_authors>Torkizadeh M</pubmed_authors><pubmed_authors>Blanco JM</pubmed_authors><pubmed_authors>Roberts LA</pubmed_authors><pubmed_authors>Bewshea CM</pubmed_authors><pubmed_authors>Horneffer-van der Sluis V</pubmed_authors><pubmed_authors>Nice R</pubmed_authors></additional><is_claimable>false</is_claimable><name>The gut microbiota and metabolome are associated with diminished COVID-19 vaccine-induced antibody responses in immunosuppressed inflammatory bowel disease patients.</name><description>&lt;h4>Background&lt;/h4>Patients with inflammatory bowel disease (IBD) treated with anti-TNF therapy exhibit attenuated humoral immune responses to vaccination against SARS-CoV-2. The gut microbiota and its functional metabolic output, which are perturbed in IBD, play an important role in shaping host immune responses. We explored whether the gut microbiota and metabolome could explain variation in anti-SARS-CoV-2 vaccination responses in immunosuppressed IBD patients.&lt;h4>Methods&lt;/h4>Faecal and serum samples were prospectively collected from infliximab-treated patients with IBD in the CLARITY-IBD study undergoing vaccination against SARS-CoV-2. Antibody responses were measured following two doses of either ChAdOx1 nCoV-19 or BNT162b2 vaccine. Patients were classified as having responses above o</description><dates><release>2023-01-01T00:00:00Z</release><publication>2023 Feb</publication><modification>2026-05-27T23:13:29.079Z</modification><creation>2024-11-07T06:13:52.644Z</creation></dates><accession>S-EPMC9831064</accession><cross_references><pubmed>36634565</pubmed><doi>10.1016/j.ebiom.2022.104430</doi></cross_references></HashMap>