{"database":"biostudies-literature","file_versions":[],"scores":null,"additional":{"submitter":["Liu H"],"funding":["Joint Special Project of Basic Agricultural Research of Yunnan Province","NSFC","The key research plan of Yunnan Province","Florida Sugarcane League","National Key Research and Development Program of China"],"pagination":["42"],"full_dataset_link":["https://www.ebi.ac.uk/biostudies/studies/S-EPMC9875459"],"repository":["biostudies-literature"],"omics_type":["Unknown"],"volume":["24(1)"],"pubmed_abstract":["Background
Sucrose phosphate synthase B (SPSB) gene encoding an important rate-limiting enzyme for sucrose synthesis in sugarcane is mainly expressed on leaves, where its alleles control sucrose synthesis. In this study, genetic variation of SPSB gene represented by different haplotypes in sugarcane was investigated in hybrid clones with high and low sugar content and various accessory species.Results
A total of 39 haplotypes of SPSB gene with 2, 824 bp in size were identified from 18 sugarcane accessions. These haplotypes mainly distributed on Chr3B, Chr3C, and Chr3D according to the AP85-441 reference genome. Single nucleotide polymorphisms (SNPs) and insertion/deletion (InDels) were very dense (42 bp/sequence variation) including 44 transitional and 23 transversional SNP"],"journal":["BMC genomics"],"pubmed_title":["Haplotype variations of sucrose phosphate synthase B gene among sugarcane accessions with different sucrose content."],"pmcid":["PMC9875459"],"funding_grant_id":["202203AK140029","202101BD070001-025, 2017FG001-069","31760411","2018YFD1000503"],"pubmed_authors":["Liu H","Yang X","Liu X","Li X","Liu J","Luo Z","Lu X","Wu C","Lin X","Xu C","You Q","Wang J"],"additional_accession":[]},"is_claimable":false,"name":"Haplotype variations of sucrose phosphate synthase B gene among sugarcane accessions with different sucrose content.","description":"Background
Sucrose phosphate synthase B (SPSB) gene encoding an important rate-limiting enzyme for sucrose synthesis in sugarcane is mainly expressed on leaves, where its alleles control sucrose synthesis. In this study, genetic variation of SPSB gene represented by different haplotypes in sugarcane was investigated in hybrid clones with high and low sugar content and various accessory species.Results
A total of 39 haplotypes of SPSB gene with 2, 824 bp in size were identified from 18 sugarcane accessions. These haplotypes mainly distributed on Chr3B, Chr3C, and Chr3D according to the AP85-441 reference genome. Single nucleotide polymorphisms (SNPs) and insertion/deletion (InDels) were very dense (42 bp/sequence variation) including 44 transitional and 23 transversional SNP","dates":{"release":"2023-01-01T00:00:00Z","publication":"2023 Jan","modification":"2026-07-14T19:05:33.725Z","creation":"2025-04-07T03:19:52.805Z"},"accession":"S-EPMC9875459","cross_references":{"pubmed":["36698074"],"doi":["10.1186/s12864-023-09139-1"]}}