{"database":"biostudies-literature","file_versions":[],"scores":null,"additional":{"omics_type":["Unknown"],"volume":["14"],"submitter":["Khan I"],"pubmed_abstract":["The <i>WRKY</i> and <i>bHLH</i> transcription factors have been implicated in the regulation of gene expression during various physiological processes in plants, especially in plant stress responses. However, little information about the heavy metal-responsive <i>SlWRKY</i> and <i>SlbHLH</i> in tomato (<i>Solanum lycopersicum</i>) is available. We performed a genome-wide investigation for these two TF families in <i>S. lycopersicum</i> and determined their role in cadmium (Cd) stress tolerance. Furthermore, ortholog analysis with the <i>Arabidopsis</i> genome led to classifying <i>WRKY</i> and <i>bHLH</i> ortholog genes into nine and 11 clusters, respectively. The comparative phylogenetic analysis revealed duplication events and gene loss in <i>Arabidopsis</i> and <i>S. lycopersicum</i>, w"],"journal":["Frontiers in plant science"],"pagination":["1100895"],"full_dataset_link":["https://www.ebi.ac.uk/biostudies/studies/S-EPMC9905835"],"repository":["biostudies-literature"],"pubmed_title":["Genome-wide annotation and expression analysis of <i>WRKY</i> and <i>bHLH</i> transcriptional factor families reveal their involvement under cadmium stress in tomato (<i>Solanum lycopersicum</i> L.)."],"pmcid":["PMC9905835"],"pubmed_authors":["Khan I","Al-Harrasi A","Bilal S","Khan AL","Kim KM","Asaf S","Jan R","Lubna"],"additional_accession":[]},"is_claimable":false,"name":"Genome-wide annotation and expression analysis of <i>WRKY</i> and <i>bHLH</i> transcriptional factor families reveal their involvement under cadmium stress in tomato (<i>Solanum lycopersicum</i> L.).","description":"The <i>WRKY</i> and <i>bHLH</i> transcription factors have been implicated in the regulation of gene expression during various physiological processes in plants, especially in plant stress responses. However, little information about the heavy metal-responsive <i>SlWRKY</i> and <i>SlbHLH</i> in tomato (<i>Solanum lycopersicum</i>) is available. We performed a genome-wide investigation for these two TF families in <i>S. lycopersicum</i> and determined their role in cadmium (Cd) stress tolerance. Furthermore, ortholog analysis with the <i>Arabidopsis</i> genome led to classifying <i>WRKY</i> and <i>bHLH</i> ortholog genes into nine and 11 clusters, respectively. The comparative phylogenetic analysis revealed duplication events and gene loss in <i>Arabidopsis</i> and <i>S. lycopersicum</i>, w","dates":{"release":"2023-01-01T00:00:00Z","publication":"2023","modification":"2026-06-23T03:18:59.062Z","creation":"2024-12-03T18:06:30.496Z"},"accession":"S-EPMC9905835","cross_references":{"pubmed":["36760632"],"doi":["10.3389/fpls.2023.1100895"]}}