{"database":"biostudies-literature","file_versions":[],"scores":null,"additional":{"submitter":["Rebenku I"],"funding":["EC | European Regional Development Fund (Europski Fond za Regionalni Razvoj)","Nemzeti Kutatási, Fejlesztési és Innovációs Hivatal (NKFI Office)"],"pagination":["2934"],"full_dataset_link":["https://www.ebi.ac.uk/biostudies/studies/S-EPMC9941493"],"repository":["biostudies-literature"],"omics_type":["Unknown"],"volume":["13(1)"],"pubmed_abstract":["The actual interaction between signaling species in cellular processes is often more important than their expression levels. Förster resonance energy transfer (FRET) is a popular tool for studying molecular interactions, since it is highly sensitive to proximity in the range of 2-10 nm. Spectral spillover-corrected quantitative (3-cube) FRET is a cost effective and versatile approach, which can be applied in flow cytometry and various modalities of fluorescence microscopy, but may be hampered by varying levels of autofluorescence. Here, we have implemented pixel-by-pixel autofluorescence correction in microscopy FRET measurements, exploiting cell-free calibration standards void of autofluorescence that allow the correct determination of all spectral spillover factors. We also present an Im"],"journal":["Scientific reports"],"pubmed_title":["Pixel-by-pixel autofluorescence corrected FRET in fluorescence microscopy improves accuracy for samples with spatially varied autofluorescence to signal ratio."],"pmcid":["PMC9941493"],"funding_grant_id":["GINOP-2.2.1-15-2017-00072","OTKA K135938"],"pubmed_authors":["Vereb G","Rebenku I","Szollosi J","Lloyd CB"],"additional_accession":[]},"is_claimable":false,"name":"Pixel-by-pixel autofluorescence corrected FRET in fluorescence microscopy improves accuracy for samples with spatially varied autofluorescence to signal ratio.","description":"The actual interaction between signaling species in cellular processes is often more important than their expression levels. Förster resonance energy transfer (FRET) is a popular tool for studying molecular interactions, since it is highly sensitive to proximity in the range of 2-10 nm. Spectral spillover-corrected quantitative (3-cube) FRET is a cost effective and versatile approach, which can be applied in flow cytometry and various modalities of fluorescence microscopy, but may be hampered by varying levels of autofluorescence. Here, we have implemented pixel-by-pixel autofluorescence correction in microscopy FRET measurements, exploiting cell-free calibration standards void of autofluorescence that allow the correct determination of all spectral spillover factors. We also present an Im","dates":{"release":"2023-01-01T00:00:00Z","publication":"2023 Feb","modification":"2025-04-26T05:28:42.882Z","creation":"2025-02-18T22:52:55.031Z"},"accession":"S-EPMC9941493","cross_references":{"pubmed":["36804608"],"doi":["10.1038/s41598-023-30098-w"]}}