{"database":"biostudies-other","file_versions":[],"scores":null,"additional":{"omics_type":["Unknown"],"submitter":["Carolina Shene"],"journal":["Biotechnology and Bioengineering"],"full_dataset_link":["https://www.ebi.ac.uk/biostudies/studies/MODEL2006010001"],"repository":["biostudies-other"],"additional_accession":["10.1002/bit.27463"],"pubmed_authors":["Krishna Kumar Tiwari","Carolina Shene"]},"is_claimable":false,"name":"Shene2020 - flux balance analysis of biomass and lipid production by Antarctic thraustochytrid Oblongichytrium","description":"Modelo_mod3_032020.m is a Matlab code used for the simulation of the growth curve of Antarctic thraustochytrid Oblongichytrium sp. RT2316-13.The model is based on the genome scale model adapted for the strain that is found in the Excel file ExcelAurant_28102019.xlsx.Flux balance analysis is used to predict the specific growth rate of the biomass, specific synthesis of neutral lipids and specific consumption rate of the nutrients.The code crea_modelo.m transform the excel file into the array model_T.mat used in by Modelo_mod3_032020.mThis model was used to generate data presented in the manuscript Dynamic flux balance analysis of biomass and lipid production by Antarctic thraustochytrid Oblongichytrium sp. RT2316-13, 2020,Carolina Shene, Paris Paredes, Liset Flores, Allison Leyton, Juan A. Asenjo, Yusuf Chisti, Biotechnology and Bioengineering, DOI: 10.1002/bit.27463.","dates":{"release":"2020-06-01T00:00:00Z","modification":"2025-07-14T17:42:47.463Z","creation":"2025-03-30T22:52:52.083Z"},"accession":"MODEL2006010001","cross_references":{"doi":["10.1002/bit.27463"]}}