{"database":"biostudies-other","file_versions":[],"scores":null,"additional":{"omics_type":["Unknown"],"volume":["180"],"submitter":["Zainab Ashimiyu-Abdusalam"],"journal":["Cell"],"pagination":["688-702.e13"],"species":["Homo sapiens"],"full_dataset_link":["https://www.ebi.ac.uk/biostudies/studies/MODEL2404080001"],"repository":["biostudies-other"],"additional_accession":["32084340"],"pubmed_authors":["Zainab Ashimiyu-Abdusalam"]},"is_claimable":false,"name":"Stokes2020 - Antibiotics discovery using deep learning approach.","description":"<p>Based on a simple E.coli growth inhibition assay, the authors trained a model capable of identifying antibiotic potential in compounds structurally divergent from conventional antibiotic drugs. One of the predicted active molecules, Halicin (SU3327), was experimentally validated in vitro and in vivo.</p><p><normal>Model Type:</normal> Predictive machine learning model.<br><normal>Model Relevance:</normal> Probability that a compound inhibits E.coli growth.<br><normal>Model Encoded by:</normal> Miquel Duran-Frigola(Ersilia)<br><normal>Metadata Submitted in BioModels by:</normal> Zainab Ashimiyu-Abdusalam</p><p>Implementation of this model code by <a href=\"https://ersilia.io/\">Ersilia</a> is available here: <br><a href=\"https://github.com/ersilia-os/eos4e40\">https://github.com/ersilia-os/eos4e40</a></p><img src=\"https://www.ebi.ac.uk/biomodels/static-assets/images/ersilia-logo.png\" alt=\"Ersilia Logo\" width=\"150\">","dates":{"release":"2024-04-08T00:00:00Z","modification":"2025-07-14T17:03:09.012Z","creation":"2025-03-31T13:25:12.555Z"},"accession":"MODEL2404080001","cross_references":{"bao":["0000348","0002305","0700004"],"stato":["STATO:0000274","STATO:0000031"],"pubmed":["32084340"],"ncit":["NCIT:C52588","NCIT:C1907","NCIT:C16309","NCIT:C19146","NCIT:C176258","NCIT:C17429","NCIT:C19148","C45329","C154407"],"edam":["topic_3336","topic_0154","topic_3474"],"cheminf":["CHEMINF:000018"],"taxonomy":["562","9606"],"efo":["0005741"],"unknown":["scikit-learn","chemprop","eos4e40"]}}