biostudies-otherUnknown13Pedro T MonteiroGenes303https://www.ebi.ac.uk/biostudies/studies/MODEL2404250002biostudies-other10.3390/genes13020303Pedro T MonteirofalseViana2022 - Cparapsilosis metabolic modelThe herein described metabolic model reports on the yeast Candida parapsilosis with the taxonomic ID 5480. Model reconstruction was performed using merlin 4.0.5, and further curation and validation were performed on OptFlux 3.0 using the IBM CPLEX solver. Throughout the curation process, reactions were edited, manually added to, or removed from the model to correct gaps in the network using KEGG pathways, MetaCyc Database, and literature data as standards.2024-04-25T00:00:00Z2025-07-14T17:28:24.514Z2025-03-30T23:10:59.942ZMODEL2404250002

4.2.1.130

1.1.3.12

1.4.1.14

4.2.1.134

2.7.7.18

1.4.1.13

1.1.1.71

1.1.1.72

1.4.1.18

3.6.1.29

4.1.2.5

2.1.1.358

1.1.1.78

2.1.1.359

1.1.1.79

4.1.2.8

3.6.1.23

5.1.3.15

3.6.1.22

3.6.1.21

2.7.2.2

2.1.1.361

2.1.1.362

3.5.1.110

2.7.2.4

2.7.2.3

4.3.1.19

2.5.1.21

2.7.7.14

2.7.7.13

4.3.1.17

2.7.2.8

2.1.1.360

2.7.7.15

2.7.7.12

1.1.1.65

1.1.1.66

3.6.1.18

3.6.1.15

3.6.1.13

2.1.1.107

2.1.1.354

2.5.1.18

2.1.1.355

6.3.1.2

2.1.1.356

6.3.1.1

2.1.1.114

2.1.1.357

2.5.1.19

4.1.1.1

6.3.1.5

2.5.1.10

2.5.1.16

2.7.7.23

2.5.1.15

6.1.1.19

2.1.1.12

6.1.1.18

2.1.1.10

1.1.1.94

1.1.1.95

6.1.1.11

6.1.1.12

2.1.1.17

6.1.1.10

1.3.2.3

6.1.1.15

6.1.1.16

2.1.1.16

2.1.1.13

6.1.1.14

2.1.1.14

2.7.1.2

2.7.1.1

2.7.1.7

3.2.1.26

3.5.1.9

2.7.1.6

3.2.1.28

2.7.1.4

1.2.4.1

1.2.4.2

3.5.1.5

2.7.1.8

3.5.1.2

3.5.1.1

3.5.1.4

3.2.1.20

3.2.1.21

3.5.1.3

1.1.1.85

2.1.1.22

1.1.1.86

5.4.99.5

1.1.1.87

5.4.99.3

1.17.1.9

1.1.1.81

5.4.99.7

6.1.1.22

6.1.1.23

6.1.1.20

6.1.1.21

6.1.1.24

1.16.3.1

6.3.2.2

6.3.2.1

6.3.2.6

1.3.3.3

6.3.2.5

1.3.3.4

1.3.3.6

6.3.2.3

4.2.1.159

1.17.1.1

3.2.1.10

1.1.1.31

1.4.1.4

2.5.1.61

3.5.99.10

1.13.11.20

1.1.1.38

6.3.5.13

1.1.1.39

1.1.1.34

1.1.1.35

1.1.1.37

3.2.1.48

2.7.4.3

1.11.1.6

1.11.1.9

2.7.4.2

2.7.4.8

2.5.1.65

1.2.1.4

1.2.1.5

2.7.4.7

2.7.4.6

1.11.1.5

1.14.18.9

1.2.1.3

1.1.1.21

1.1.1.29

5.5.1.4

1.1.1.23

1.1.1.25

1.1.1.26

6.3.3.1

3.3.2.10

1.14.14.80

7.1.1.9

6.3.3.2

3.2.1.33

2.5.1.54

7.1.1.8

1.14.14.85

7.1.1.2

2.5.1.58

1.13.11.27

1.5.3.17

3.3.1.1

2.4.1.252

1.1.1.50

1.1.1.59

5.4.2.8

5.4.2.7

1.1.5.3

5.4.2.2

4.2.1.104

4.2.1.103

2.5.1.47

4.2.1.109

5.4.2.5

2.5.1.49

2.5.1.48

5.4.2.3

1.1.1.41

1.1.1.42

1.14.19.6

1.1.1.44

2.8.1.1

1.13.11.54

4.2.1.122

1.14.19.1

3.1.6.1

1.14.19.2

1.13.11.52

1.1.1.40

2.8.1.8

5.4.2.12

1.8.1.10

1.16.1.7

3.1.6.8

1.1.1.45

1.3.1.9

2.5.1.39

1.16.1.9

6.3.4.4

1.3.1.6

6.3.4.3

6.3.4.2

1.3.1.8

5.4.2.11

4.2.1.116

1.13.12.16

4.2.1.114

6.3.4.6

6.3.4.5

3.2.1.52

4.2.1.119

6.3.4.9

1.4.3.4

1.4.3.5

1.4.3.2

2.4.1.15

2.7.4.25

1.1.1.337

4.1.1.74

3.1.3.97

3.1.3.99

2.4.1.16

4.1.2.48

1.5.1.3

1.14.19.41

1.5.1.5

1.5.1.7

3.5.4.6

5.3.1.16

3.5.4.9

3.1.3.95

4.1.1.72

1.1.1.105

3.5.4.3

2.7.4.22

3.5.1.24

3.5.4.5

1.1.1.102

1.1.1.101

1.1.1.100

3.5.4.1

3.5.1.25

1.1.1.220

1.2.1.88

2.5.1.96

1.1.1.205

3.1.4.53

3.1.3.86

3.1.3.87

3.1.3.89

1.14.99.60

4.1.3.27

1.2.1.79

3.2.1.118

4.1.1.80

6.3.5.3

3.1.3.81

6.3.5.2

3.2.1.117

6.3.5.1

1.13.99.1

3.5.1.35

6.3.5.5

2.4.1.117

3.5.1.33

6.3.5.4

1.1.1.211

3.5.1.38

1.1.1.330

4.1.2.27

2.4.1.34

1.4.3.16

2.5.1.84

3.1.3.77

1.1.1.19

3.1.4.46

1.1.1.14

1.4.3.19

4.1.2.25

1.15.1.1

3.5.99.5

3.5.99.2

4.1.1.50

2.5.1.87

3.5.5.1

2.4.1.205

3.5.5.4

2.7.1.91

1.14.13.9

2.4.1.25

1.1.1.307

5.1.99.1

2.7.4.14

1.4.3.21

1.13.11.11

1.1.99.2

1.4.3.22

3.1.3.64

4.1.1.65

3.1.3.67

3.1.4.35

3.1.3.68

5.3.1.24

5.3.1.23

3.5.1.19

1.2.1.59

2.7.4.10

2.7.4.11

2.7.4.12

2.5.1.78

1.4.1.2

1.4.1.3

3.7.1.3

1.2.1.53

7.2.2.19

2.1.1.319

2.1.1.321

2.1.1.201

4.6.1.2

4.6.1.1

3.5.2.9

2.4.2.1

2.1.1.320

1.1.1.303

3.5.2.5

1.1.1.302

2.7.1.71

3.5.2.3

2.7.1.74

3.5.3.11

3.5.1.74

3.5.1.75

3.2.1.165

5.1.1.24

1.14.14.1

2.5.1.9

2.5.1.6

2.7.1.82

1.14.19.17

2.6.1.6

2.6.1.5

2.7.1.56

2.6.1.7

2.6.1.2

2.6.1.1

2.6.1.4

2.7.1.59

2.6.1.3

2.5.1.1

2.6.1.9

4.1.3.38

1.14.19.20

4.1.99.12

4.1.3.30

4.1.99.16

2.1.1.100

1.14.19.26

2.7.1.50

3.5.3.4

3.5.1.49

2.7.1.53

3.5.3.1

1.14.15.7

2.7.1.68

3.6.1.9

2.7.1.67

3.6.1.8

1.2.1.90

3.6.1.3

3.6.1.1

3.6.1.6

3.6.1.5

1.5.1.2

4.3.2.10

1.3.5.2

4.1.3.40

3.5.1.54

1.2.1.95

2.7.1.36

2.7.1.35

1.4.7.1

4.2.1.84

2.7.1.34

2.7.1.33

3.5.4.12

2.7.1.39

3.5.4.10

3.1.3.11

3.1.3.12

3.1.3.15

1.1.1.184

2.7.1.105

3.5.4.16

2.7.1.108

2.3.3.3

2.7.1.32

3.5.4.19

2.3.3.9

2.7.1.30

4.2.3.22

3.1.1.67

2.4.2.59

3.1.1.5

1.14.12.17

1.14.11.48

2.3.2.2

2.7.1.49

4.2.1.91

2.7.1.48

6.3.1.20

1.3.1.96

1.13.11.6

1.3.1.93

1.3.1.104

1.1.1.170

3.5.4.26

3.5.4.25

2.4.1.83

2.7.2.11

1.1.1.299

4.2.1.96

2.7.1.40

2.4.1.80

2.7.1.14

2.7.1.11

3.1.2.22

3.1.2.21

2.7.1.17

2.7.1.15

1.1.1.284

1.1.1.283

1.1.1.282

2.4.1.1

3.5.1.89

1.1.1.169

1.1.1.289

1.6.2.4

1.1.1.286

1.14.11.65

1.6.2.2

3.1.2.14

1.14.11.66

2.7.1.25

1.14.11.67

2.7.1.24

3.1.2.12

1.14.11.68

1.14.11.69

2.7.1.22

2.7.1.29

2.3.1.199

2.7.1.28

2.3.3.1

2.7.1.26

2.4.2.2

2.4.2.3

2.4.2.4

2.4.2.7

2.4.2.8

2.4.2.9

6.3.2.17

1.1.1.270

2.7.1.137

6.3.2.12

1.1.1.156

2.7.1.21

2.7.1.20

4.1.1.37

1.4.9.2

2.4.2.22

3.1.3.106

3.1.3.102

4.1.1.33

2.4.2.28

2.3.1.181

3.1.3.104

1.11.1.15

4.1.1.36

1.2.1.47

1.1.1.383

1.1.1.381

1.2.1.49

1.2.1.41

2.3.1.4

1.6.5.2

3.4.19.13

2.3.1.9

2.4.2.14

3.1.4.17

2.3.1.174

2.4.2.15

2.3.1.176

2.4.2.10

2.3.1.179

1.7.3.3

3.1.4.11

4.1.1.43

3.1.4.12

2.4.2.18

4.1.2.12

3.1.3.46

4.1.2.13

2.4.2.17

2.3.1.291

2.4.2.19

1.1.1.372

1.11.1.21

1.1.1.250

1.8.1.9

1.2.1.38

1.2.1.39

1.3.8.1

1.1.1.138

1.8.1.3

1.8.1.2

1.8.1.7

1.3.8.7

1.2.1.31

1.3.8.8

1.8.1.4

1.3.8.9

4.1.1.15

4.1.1.17

2.3.1.286

1.1.1.117

2.5.1.103

5.3.3.10

4.1.1.11

3.1.3.35

3.1.3.36

3.1.3.37

1.2.1.24

2.3.3.10

1.2.1.27

1.2.1.29

2.3.3.13

2.3.3.16

2.3.1.158

1.1.1.363

3.1.3.27

2.3.1.271

4.3.3.6

4.1.1.29

1.14.11.8

1.14.11.27

2.3.1.155

2.6.1.19

2.3.1.1

2.6.1.16

4.1.1.21

4.1.1.23

2.6.1.13

3.1.3.25

2.6.1.11

1.2.1.16

1.2.1.18

2.7.1.213

4.4.1.1

1.2.1.19

1.1.1.116

1.2.1.12

1.2.1.11

1.1.1.351

2.1.3.2

2.1.3.3

4.4.1.17

5.3.3.8

4.4.1.13

2.1.1.71

4.4.1.11

2.6.1.23

2.3.1.86

2.2.1.6

2.3.1.85

5.3.3.2

6.1.1.9

6.1.1.7

6.1.1.6

2.7.6.2

6.1.1.5

2.7.6.1

6.1.1.3

6.1.1.2

1.5.1.20

1.14.14.30

2.7.6.3

4.3.2.7

1.1.1.1

1.1.1.2

1.1.1.3

4.3.2.3

4.3.2.2

4.3.2.1

6.3.4.11

6.3.4.10

1.3.1.13

2.6.1.39

1.3.1.10

6.3.4.13

6.3.4.15

4.2.1.17

4.2.1.19

6.2.1.17

6.2.1.15

3.2.1.74

4.2.1.11

6.2.1.11

4.2.1.10

2.1.2.3

6.4.1.2

2.1.2.1

6.4.1.1

2.1.2.2

1.7.1.17

5.3.2.5

6.3.4.21

1.14.14.154

2.3.1.63

2.6.1.44

2.7.8.41

2.3.1.61

2.6.1.42

4.6.1.13

4.2.1.24

4.2.3.1

3.1.3.1

4.2.3.4

3.1.3.2

1.14.14.52

4.2.1.20

4.2.3.5

1.14.14.59

2.8.3.10

3.1.4.2

1.3.1.38

1.3.1.39

3.1.4.3

1.1.2.3

3.1.4.4

1.14.14.145

6.1.1.1

2.6.1.57

2.6.1.55

2.3.1.51

2.2.1.1

2.6.1.52

2.3.1.50

2.2.1.2

5.1.1.3

3.1.3.100

2.2.1.3

1.14.13.228

4.99.1.1

4.2.1.36

4.99.1.4

7.1.2.1

4.2.1.33

7.1.2.2

3.1.1.31

5.3.1.9

5.3.1.6

5.3.1.8

2.6.1.67

2.7.1.150

1.3.1.42

2.3.1.42

3.6.1.66

2.7.1.144

3.6.1.64

3.1.2.1

3.1.2.2

2.7.8.2

2.7.8.1

2.7.8.8

2.7.7.53

2.7.8.5

3.1.1.23

6.2.1.5

2.1.1.45

4.2.1.51

2.1.2.10

3.1.3.3

3.1.3.4

2.3.1.39

6.2.1.1

2.1.1.41

4.2.1.2

3.1.3.5

2.3.1.38

6.2.1.3

2.3.1.37

4.2.1.1

2.3.1.36

2.3.1.35

2.6.1.78

2.3.1.31

3.6.1.53

2.7.1.154

3.6.1.52

4.1.3.1

2.7.1.158

4.2.1.59

2.1.2.7

2.7.7.64

1.17.4.1

3.1.1.13

4.4.1.35

1.8.4.13

2.3.1.24

2.3.1.23

2.3.1.22

2.1.1.59

3.1.1.17

2.7.1.173

2.3.1.20

3.6.1.45

2.7.1.174

3.6.1.43

2.6.1.85

3.6.1.41

3.6.1.40

2.7.7.1

1.8.4.14

2.7.7.5

4.2.1.3

2.7.7.4

1.1.1.8

3.1.1.3

1.1.1.9

2.7.7.3

3.1.1.4

2.7.7.2

2.7.7.9

4.2.1.9

4.4.1.28

4.2.1.70

1.14.14.17

2.1.1.64

3.1.2.4

2.3.1.16

3.1.2.6

2.1.1.60

2.3.1.15

4.4.1.22

3.6.1.39

2.3.1.12

1.3.1.76

5.1.3.2

1.3.1.70

1.8.4.8

5.1.3.1

3.6.1.31

1.3.1.71

2.7.7.41

5.1.3.3

5.1.3.7

1.5.1.10

4.2.1.75

2.1.1.6

2.7.8.11

1.5.1.15

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