<HashMap><database>biostudies-other</database><scores/><additional><submitter>Coldren CD</submitter><pagination>521-528</pagination><full_dataset_link>https://www.ebi.ac.uk/biostudies/studies/S-ECPF-GEOD-4342</full_dataset_link><project>EurocanPlatform</project><abstract>Eleven NSCLC cell lines with widely divergent gefitinib sensitivities were compared using gene expression.  Genes associated with gefitinib response were used to classify additional NSCLC lines with unknown gefitnib sensitivity. A subset of the test set data was tested for gefitinib sensitivity, and results correlated strongly with the gene expression-based predictions; All eleven training set lines, and seven test set lines had both HGU133A and B chips done, while other test set lines had only HGU133As. Experiment Overall Design: Baseline (unstimulated) gene expression was measured in a large panel of NSCLC cell lines.</abstract><repository>biostudies-other</repository><experiment_type>transcription profiling by array</experiment_type><data_source>EurocanPlatform</data_source><omics_type>Unknown</omics_type><volume>4</volume><journal>Molecular cancer research : MCR</journal><species>Homo sapiens</species><pubmed_authors>Zeng C</pubmed_authors><pubmed_authors>Lapadat R</pubmed_authors><pubmed_authors>Helfrich BA</pubmed_authors><pubmed_authors>Hirsch FR</pubmed_authors><pubmed_authors>Sugita M</pubmed_authors><pubmed_authors>Witta SE</pubmed_authors><pubmed_authors>Geraci MW</pubmed_authors><pubmed_authors>Coldren CD</pubmed_authors><pubmed_authors>Franklin WA</pubmed_authors><pubmed_authors>Barón A</pubmed_authors><pubmed_authors>Bunn PA Jr</pubmed_authors></additional><is_claimable>false</is_claimable><name>Transcription profiling of non squamous cell lung cancer cell lines to investigate sensititivity to gefitinib and predict this in previously untested cell lines</name><description>Eleven NSCLC cell lines with widely divergent gefitinib sensitivities were compared using gene expression.  Genes associated with gefitinib response were used to classify additional NSCLC lines with unknown gefitnib sensitivity. A subset of the test set data was tested for gefitinib sensitivity, and results correlated strongly with the gene expression-based predictions; All eleven training set lines, and seven test set lines had both HGU133A and B chips done, while other test set lines had only HGU133As. Experiment Overall Design: Baseline (unstimulated) gene expression was measured in a large panel of NSCLC cell lines.</description><dates><release>2016-04-14T14:19:38Z</release><publication>2006 Aug</publication><modification>2016-04-14T14:19:38Z</modification><creation>2016-04-14T14:19:38Z</creation></dates><accession>S-ECPF-GEOD-4342</accession><cross_references><GEO>GSE4342</GEO><ArrayExpress>E-GEOD-4342</ArrayExpress><EFO>EFO_0000322</EFO><EFO>EFO_0001071</EFO><ArrayExpress files>E-GEOD-4342</ArrayExpress files></cross_references></HashMap>