<HashMap><database>EGA</database><scores/><additional><omics_type>Genomics</omics_type><contact_person>Cristiano Fava</contact_person><full_dataset_link>https://ega-archive.org/dacs/EGAC00001000226</full_dataset_link><host>EGA</host><description>EGA DAC EGAC00001000226</description><repository>EGA</repository><email>cristiano.fava@med.lu.se</email><pubmed_abstract>Genetic risk scores (GRS), summing up the total effect of several single-nucleotide polymorphisms (SNPs) in genes associated with either coronary risk or cardiovascular risk factors, have been tested for association with ischemic stroke with conflicting results. Recently an association was found between a GRS based on 29 SNPs discovered by genome-wide association studies and hypertension. The aim of our study was to investigate the possible association of the same GRS with ischemic stroke on top of other 'traditional risk factors', also testing its potential improvement in indices of discrimination and reclassification, in a Swedish case-control study. Twenty-nine SNPs were genotyped in 3677 stroke cases and 2415 controls included in the Lund Stroke Register (LSR), the Malmö Diet and Cancer (MDC) study and the Sahlgrenska Academy Study on Ischemic Stroke (SAHLSIS). The analysis was conducted in the combined sample, and separately for the three studies. After adjustment for hypertension, diabetes mellitus and smoking habits, the GRS was associated with ischemic stroke in the combined sample (OR (95% CI) 1.086 (1.029-1.147) per SD increase in the GRS P=0.003) with similar trends in all three samples: LSR (1.050 (0.967-1.140); P=0.25), MDC (1.168 (1.060-1.288); P=0.002) and SAHLSIS (1.124 (0.997-1.267); P=0.055). Measures of risk discrimination and reclassification improved marginally using the GRS. A blood pressure GRS is independently associated with ischemic stroke risk in three Swedish case-control studies, however, the effect size is low and adds marginally to prediction of stroke on top of traditional risk factors including hypertension.</pubmed_abstract><pubmed_title>A genetic risk score for hypertension associates with the risk of ischemic stroke in a Swedish case-control study.</pubmed_title><pubmed_authors>Fava Cristiano C, Sjögren Marketa M, Olsson Sandra S, Lövkvist Håkan H, Jood Katarina K, Engström Gunnar G, Hedblad Bo B, Norrving Bo B, Jern Christina C, Lindgren Arne A, Melander Olle O</pubmed_authors><pubmed_abstract_synonyms>CVA (cerebral vascular accident), AW060611, Genome-Wide Association, Food Patterns, Materials, Cryptogenic Ischemic Strokes, Apoplexy, Strokes, Ischemic, HSN1E, determination, CVA (Cerebrovascular Accident), Whole Genome Association Study, Case Referent Studies, Blood, Risk Factor Score, Tumor, Ischaemic Strokes, Relative, Acute Stroke, Risk Factors, Associations, Case Referrent Studies, cerebrovascular accident, CVA, Vascular Accidents, cerebral infarction, Systolic, SYNDROME, Correlates, Matched Case-Control Study, Nested Case-Control Studies, DM - Diabetes mellitus, Cryptogenic Embolism, GWA Study, me75, Case-Referrent Studies, STROKE, Cryptogenic Stroke, Matched, Case Base Studies, Case Control, Ischemic Stroke, D17Mit170, T1, Case-Compeer, Genome-Wide Association Studies, Food, genetic, Social, Stroke, Ischaemic, Diabetes mellitus, forecasting, ADAM 11, Health Correlates, malignant neoplasm, Habit Disturbance, sample, Malignancies, ACC-2, ACC-1, Nucleotide, Acute Cerebrovascular Accidents, CXXC finger protein 9, Nested Case Control Studies, Tumors, DM, High., High Blood Pressures, familial, Wake-up, Case-Compeer Studies, DCBCK, Case-Comparison Study, Case-Base Studies, Cryptogenic Embolism Stroke, Cerebrovascular Stroke, High blood pressure, Tl3, Cerebrovascular Apoplexy, Tl2, Genome-Wide, results, Habit Disturbances, Brain Vascular Accident, Acute Cerebrovascular Accident, Case-Referent Studies, Benign, and cysteine-rich protein, Genome Wide Association Study, Relative Risks, Genetic Materials, Score, Cryptogenic Ischemic, NOS, BFL1, Whole Genome Association Analysis, Cerebrovascular, Cerebrovascular Accidents, Genetic Material, nucleotides, Smoking, HTN, ADCADN, Cerebral Stroke, Case-Referent Study, tobacco use disorder, CVAs (Cerebrovascular Accident), Factors, Social Risk Factors, CD11c+CD123- DC, Risk, GRS, UNQ203/PRO229, Metalloproteinase-like, DNA (cytosine-5-)-methyltransferase 1, STCP-1, Benign Neoplasms, Matched Case-Control, Case-Comparison, Malignant Neoplasms, Diabetes NOS, Hypertension, Cerebrovascular Strokes, Social Risk, SCYA22, Cerebrovascular accident (disorder), Health, Dietary Patterns, Material, stroke, Cistron, inherited genetic, Association Study, Matched Case-Control Studies, Scya22, Cerebrovascular accident (disorder) [Ambiguous], hypertension, Ischemic Strokes, Brain, Pulse Pressure, Cryptogenic Strokes, Cerebrovascular accidents, Smoking Behavior, Genome Wide Association Analysis, Neoplasms, Benign Neoplasm, Gene, Malignant, Case-Comparison Studies, Diastolic Pressure, Patterns, Aim, AIM, GWA Studies, Cryptogenic, Blood Pressures, veiled cell, Embolism Stroke, Studies, Diets, Diabetes mellitus (disorder), HBPA1, Nested Case-Control, Low, Cerebral, Ischaemic Stroke, Risk Factor, Acute Ischemic, congenital MD, Stroke/CVA - undefined, Blood Pressure, DNMT1, study, Populations at Risk, Genetic, Vascular Accident, Case-Referent, Food Pattern, Stroke and cerebrovascular accident unspecified, DNMT1_HUMAN, ILDR3, Malignancy, GWA, Risk Score, Case Control Studies, Case-Control Study, Wake up Stroke, Population at Risk, DC|B-CK, Wake-up Strokes, Genome Wide Association Scan, Brain Vascular Accidents, Study, Pattern, Neoplasias, API6, BCL2L5, Stroke NOS (disorder), Case-Control, Smoking Habits, Diastolic, Habit, Social Risk Factor, disintegrin-like, Dietary Pattern, Behaviors, constitutitional genetic, Diabetes, High Blood Pressure, diabetes, DNA MTase HsaI, Cancer, Wake-up Stroke, DNA (cytosine-5)-methyltransferase 1, Malignant Neoplasm, cou, MDC, Mdc, DNMT, Acute Ischemic Strokes, Factor, Cerebrovascular accident, MCMT, Cistrons, Risk Factor Scores, Behavior, Cryptogenic Embolism Strokes, diabetes mellitus (disease), futurology, Cerebrovascular Apoplexya, Lr, MT, Case-Referrent, DNA methyltransferase HsaI, mDC, Pressure, chemical analysis, Smoking Habit, (CVA), Neoplasm, ISCHSTR, Acute Ischemic Stroke, Relative Risk, Ischaemic stroke, Matched Case Control Studies, CXXC9, primary cancer, interdigitating cell, Systolic Pressure, Nested, CT-2, ABCD-1, diabetes mellitus, Stroke NOS, CVA - Cerebrovascular accident unspecified, Case-Control Studies, Dietary, Risks, Case-Base, Case-Referrent Study, Cerebrovascular Accident, Cancers, smoking, CXXC-type zinc finger protein 9, Nested Case-Control Study, malignant tumor, Cerebral Strokes, sample population, Genome Wide Association Studies, Risk Scores, High, Brain attack, Acute Strokes, Acute, LISCH7, Pulse, Pressures, Case Comparison Studies, Stroke and cerebrovascular accident unspecified (disorder), Smoking Behaviors, Case Control Study, Bra, Association Studies, Cryptogenic Ischemic Stroke, assay, hereditary, CLEC2C, Neoplasia, CEREBROVASCULAR ACCIDENT, m.HsaI, Habits</pubmed_abstract_synonyms><name_synonyms>fbwd4, AW060611, Ischemic Strokes, CVA (cerebral vascular accident), Brain, l(2)04454, DmelCG1772, Cryptogenic Strokes, Cryptogenic Ischemic Strokes, Apoplexy, CIB1, Strokes, Ischemic, CVA (Cerebrovascular Accident), p21[dacapo], Ischaemic Strokes, cdi4, Acute Stroke, Cryptogenic, veiled cell, CVA, Embolism Stroke, FBWD4, Cdi4, CDI4, Vascular Accidents, cerebral infarction, Decapo, Cerebral, SYNDROME, Ischaemic Stroke, Acute Ischemic, congenital MD, Stroke/CVA - undefined, Cryptogenic Embolism, Vascular Accident, ILDR3, Stroke and cerebrovascular accident unspecified, shsf3, STROKE, shfm3, Cryptogenic Stroke, study., E(Sev-CycE)2B, Ischemic Stroke, Fbw4, Wake up Stroke, FBW4, DC|B-CK, Wake-up Strokes, Brain Vascular Accidents, Stroke, Stroke NOS (disorder), SHFM3, Ischaemic, Dac, DAC, ADAM 11, dacapo/cyclin-dependent kinase interactor 4, AI182278, Dap, CES5A1, P15, fbw4, disintegrin-like, SHSF3, Acute Cerebrovascular Accidents, Wake-up Stroke, dac, MDC, Mdc, Wake-up, Acute Ischemic Strokes, DCBCK, Cerebrovascular accident, Cryptogenic Embolism Stroke, Cerebrovascular Stroke, dactylin, Cerebrovascular Apoplexy, Cryptogenic Embolism Strokes, E130112M23Rik, Brain Vascular Accident, Acute Cerebrovascular Accident, Cerebrovascular Apoplexya, and cysteine-rich protein, dactylyn, mDC, p21, (CVA), CG1772, Cryptogenic Ischemic, p27, ISCHSTR, Cerebrovascular, Cerebrovascular Accidents, Acute Ischemic Stroke, Ischaemic stroke, Cerebral Stroke, interdigitating cell, CVAs (Cerebrovascular Accident), CD11c+CD123- DC, ABCD-1, Metalloproteinase-like, Stroke NOS, CVA - Cerebrovascular accident unspecified, STCP-1, Cerebrovascular Accident, Cerebral Strokes, Cerebrovascular Strokes, Dach, CDKN2B, SCYA22, Cerebrovascular accident (disorder), Acute Strokes, Acute, LISCH7, p27[Dap], Stroke and cerebrovascular accident unspecified (disorder), stroke, Cryptogenic Ischemic Stroke, Scya22, Cerebrovascular accident (disorder) [Ambiguous], CEREBROVASCULAR ACCIDENT</name_synonyms><pubmed_title_synonyms>Ischemic Strokes, CVA (cerebral vascular accident), Brain, Cryptogenic Strokes, Cryptogenic Ischemic Strokes, Apoplexy, Strokes, Ischemic, CVA (Cerebrovascular Accident), Case Referent Studies, Ischaemic Strokes, Case-Comparison Studies, Relative, Acute Stroke, Cryptogenic, Blood Pressures, Case Referrent Studies, CVA, Embolism Stroke, Studies, Vascular Accidents, cerebral infarction, Nested Case-Control, Cerebral, SYNDROME, Ischaemic Stroke, Acute Ischemic, Matched Case-Control Study, Nested Case-Control Studies, Stroke/CVA - undefined, Blood Pressure, Cryptogenic Embolism, Case-Referrent Studies, Vascular Accident, Case-Referent, Stroke and cerebrovascular accident unspecified, STROKE, Cryptogenic Stroke, Matched, Case Base Studies, Case Control, Case Control Studies, Case-Control Study, Ischemic Stroke, Wake up Stroke, Case-Compeer, Wake-up Strokes, genetic, Brain Vascular Accidents, Study, Stroke, Stroke NOS (disorder), Ischaemic, Case-Control, constitutitional genetic, Acute Cerebrovascular Accidents, Nested Case Control Studies, High Blood Pressure, Wake-up Stroke, High Blood Pressures, familial, Wake-up, Case-Compeer Studies, Acute Ischemic Strokes, Case-Comparison Study, Case-Base Studies, Cerebrovascular accident, High blood pressure, Cryptogenic Embolism Stroke, Cerebrovascular Stroke, Cerebrovascular Apoplexy, Cryptogenic Embolism Strokes, Brain Vascular Accident, Acute Cerebrovascular Accident, Cerebrovascular Apoplexya, Case-Referent Studies, Case-Referrent, Relative Risks, (CVA), Cryptogenic Ischemic, ISCHSTR, Cerebrovascular, Cerebrovascular Accidents, Acute Ischemic Stroke, Relative Risk, Ischaemic stroke, Matched Case Control Studies, HTN, Cerebral Stroke, Case-Referent Study, CVAs (Cerebrovascular Accident), Nested, Risk, Stroke NOS, CVA - Cerebrovascular accident unspecified, Case-Control Studies, Risks, Case-Base, Case-Referrent Study, Cerebrovascular Accident, Matched Case-Control, Nested Case-Control Study, Cerebral Strokes, Case-Comparison, Hypertension, High, Cerebrovascular Strokes, Cerebrovascular accident (disorder), Acute Strokes, Acute, Case Comparison Studies, Stroke and cerebrovascular accident unspecified (disorder), stroke, Case Control Study, inherited genetic, Cryptogenic Ischemic Stroke, Matched Case-Control Studies, hereditary, Cerebrovascular accident (disorder) [Ambiguous], hypertension, CEREBROVASCULAR ACCIDENT, Case-Referrent.</pubmed_title_synonyms></additional><is_claimable>false</is_claimable><name>DAC for the MDC-LSR-SAHLSIS ischemic stroke study</name><description>Data Access Committee EGAC00001000226</description><dates><output>2025-1-9</output></dates><accession>EGAC00001000226</accession><cross_references><TAXONOMY>9606</TAXONOMY><pubmed>25293721</pubmed><EGA>EGAS00001000936</EGA><EGA>EGAD00010000620</EGA><EGA>EGAD00010000618</EGA></cross_references></HashMap>