{"database":"EGA","file_versions":[],"scores":null,"additional":{"omics_type":["Genomics"],"dataset_type":["N/A"],"full_dataset_link":["https://ega-archive.org/datasets/EGAD00001001660"],"sample_count":["24"],"description":["EGA dataset EGAD00001001660"],"repository":["EGA"],"title":["Genomic analysis of HPV-positive versus HPV-negative oesophageal adenocarcinoma"],"name_synonyms":["Vasp, VASP, Data Set., DmelCG15112, ENHANCER OF ATNSI ACTIVITY, MENA, NDPP1, l(2)02029, Enb, enb, ENA, Ena, CG15112, ENA/VASP"],"description_synonyms":["Human papilloma Virus infection, treatment, Therapy, average, WES, Complete Transcriptome, Complete, Complete Transcriptome Sequencing, Exome Sequencings, Complete Exome Sequencings, primary hepatic portal vein, Complete Exome, human papilloma virus infection, Complete Exome Sequencing, Whole Transcriptome Sequencing, HPV, Exome, Tissue, Human papillomavirus, Human Papillomavirus infection, Treatments, Sequencing, portal vein, Exome Sequencing, Whole Exome, Human Papillomavirus Infection, Human Papilloma Virus Infection, Therapeutic, Whole, Human papillomavirus disease or disorder, Whole Exome Sequencing, disease management, Therapies, HPV infection, primary hepatic portal veins, Treatment, Whole Transcriptome, Transcriptome Sequencing, simple tissue, Mutations., Transcriptome Sequencings, Human papillomavirus infectious disease, Human papillomavirus caused disease or disorder, vena portae hepatis"],"additional_accession":[]},"is_claimable":false,"name":"ena-DATASET-GARVAN-29-10-2015-06:17:06:937-61 - samples","description":"Whole exome sequencing was performed to explore the mutational landscape and potential molecular signature of HPV-positive versus HPV-negative OAC. Four hr-HPV-positive and 8 HPV-negative treatment-naive fresh-frozen OAC tissue specimens and matched normal tissue were analysed to identify somatic genomic mutations","dates":{"updated":"2017-07-26 15:39:26"},"accession":"EGAD00001001660","cross_references":{"TAXONOMY":["9606"],"EGA":["EGAC00001000367","EGAS00001001340"]}}