<HashMap><database>EGA</database><scores/><additional><omics_type>Genomics</omics_type><dataset_type>Illumina HiSeq 2500;ILLUMINA</dataset_type><full_dataset_link>https://ega-archive.org/datasets/EGAD00001003217</full_dataset_link><sample_count>35</sample_count><description>EGA dataset EGAD00001003217</description><repository>EGA</repository><title>Precursor lesions, clonal architecture and relapse in Wilms nephroblastoma</title></additional><is_claimable>false</is_claimable><name>EGAS00001001422-sc-20170309 - samples</name><description>Targeted resequencing at high depth (21 genes, 9 chromosomal regions): at least 4 FFPE samples per case and matched germline DNA: * 100 cases with detailed outcome data, including 15 cases with tumour relapse (515 samples) * 40 cases with matched pre-chemotherapy biopsies (240 samples) * 50 nephrogenic rests matched to above cases (50 samples)
We expect a proportion (possibly 10%) of cases to be mutationally silent on the above studies, and propose to subsequently carry out integrated whole-genome, methylome and transcriptome studies on matched frozen tissue from these cases</description><dates><updated>2017-07-26 15:39:29</updated></dates><accession>EGAD00001003217</accession><cross_references><TAXONOMY>9606</TAXONOMY><EGA>EGAC00001000000</EGA><EGA>EGAS00001001422</EGA></cross_references></HashMap>