{"database":"EGA","file_versions":[],"scores":null,"additional":{"omics_type":["Genomics"],"dataset_type":["Illumina HiSeq 2000;ILLUMINA"],"full_dataset_link":["https://ega-archive.org/datasets/EGAD00001003461"],"sample_count":["38"],"description":["EGA dataset EGAD00001003461"],"repository":["EGA"],"title":["H3K27ac ChIP-seq in primary prostate tumours"],"name_synonyms":["Vasp, VASP, Data Set., DmelCG15112, ENHANCER OF ATNSI ACTIVITY, MENA, NDPP1, l(2)02029, Enb, enb, ENA, Ena, CG15112, ENA/VASP"],"description_synonyms":["HSPABP2, ChIP-Chip, DNS, Chromatin Immuno-precipitation, (Deoxyribonucleotide)n, neoplasia, Neoplasms, 2210017D18Rik, dCHIP, CLIP-Seq, SCAR16, Assay for Transposase-Accessible Chromatin Using Sequencing, Tumor, Deoxyribonucleic acids, HiSeq 2000, NEOPL, Relative, DmelCG5203, Deoxyribonucleic Acid, Chromatin Immunoprecipitation Sequencing-Chip, neoplasm, 2310040B03Rik, ChIA-PET, Chromatin Immunoprecipitation Sequencing Chip, Chromatin Immuno precipitation Sequencing, thymus nucleic acid, NY-CO-7, Genomes, ChIP, Chip, Chromatin Immunoprecipitation Paired End Tag, cell process disease, tumor disease, Chromatin Immuno Precipitation Paired End Tag, neoplasm (disease), Cross-Linking and Immunoprecipitation Followed by Deep Sequencing, CHIP, Double Stranded, tumour, Deoxyribonucleic acid, Sequencing, Chromatin Immunoprecipitation Paired-End Tag, chip, MALIGNANT AND UNSPECIFIED (INCL CYSTS AND POLYPS), HHT1., DmelCG3924, ATAC-Seq, Chromatin Immunoprecipitation Sequencing-Chips, AW046544, Double-Stranded DNA, (Deoxyribonucleotide)m, tumor, UBOX1, deoxyribonucleic acids, DNAn, 0610033N24Rik, Neoplastic Growth, PP1131, HHT1, Tumors, HITS-CLIP, High Throughput Sequencing of RNA Isolated by Crosslinking Immunoprecipitation, Prostates, l(2)k04405, Edg, DNAn+1, Cross Linking and Immunoprecipitation Followed by Deep Sequencing, CG5203, ChIP Sequencing, neoplastic disease, Double-Stranded, l(2)04405, ChIP-PET, tumours, ChIP-Exo, (Deoxyribonucleotide)n+m, neoplastic growth, male prostate, Relative Risks, High-Throughput Sequencing of RNA Isolated by Crosslinking Immunoprecipitation, ds-DNA, desoxyribose nucleic acid, END, Relative Risk, SDCCAG7, dLdb, Risk, Ldb, LDB, Risks, Chromatin Immunoprecipitation, Chromatin Immuno-precipitation Sequencing, whole genome, ChIP Exonuclease, CG3924, ChIP-Seq, disease of cellular proliferation, Assay for Transposase Accessible Chromatin Using Sequencing, dLDB/Chip, Chromatin Immuno-Precipitation Paired-End Tag, ds DNA, Desoxyribonukleinsaeure, DNA, ORW1, other neoplasm, ChIP-Exonuclease, prostate, NEOPLASMS BENIGN, Neoplasia, prostata"],"additional_accession":[]},"is_claimable":false,"name":"ena-DATASET-UHN-25-07-2017-17:16:46:823-752 - samples","description":"H3K27ac ChIP-seq and input genome sequencing was performed in 19 primary prostate tumours classified as intermediate risk. Sequencing of ChIP DNA was performed on an Illumina HiSeq 2000 as either single end 50 bp reads (for 7 samples) or paired end 100 bp reads (for 12 samples). Input DNA from all samples was sequenced using single-end 50 bp reads. The files provided are in fastq format.","dates":{"updated":"2018-04-27 13:50:56"},"accession":"EGAD00001003461","cross_references":{"TAXONOMY":["9606"],"EGA":["EGAC00001000010","EGAS00001002496"]}}