<HashMap><database>EGA</database><scores/><additional><omics_type>Genomics</omics_type><dataset_type>Illumina HiSeq 2500;ILLUMINA</dataset_type><full_dataset_link>https://ega-archive.org/datasets/EGAD00001003987</full_dataset_link><sample_count>94</sample_count><description>EGA dataset EGAD00001003987</description><repository>EGA</repository><title>Whole Exome sequencing of Gingivo-buccal Cancer - ICGC India Project Batch04</title><name_synonyms>1200011O22Rik, Centromere protein 33, ORCA, AU042569, Orca, WXS., ORC-associated protein, AW548074, CENP-33, Origin recognition complex-associated protein</name_synonyms><description_synonyms>ORAL NEOPL, Cancer of the Mouth, whole exome, neoplasm of tongue, BamF, bim, DNS, biml, (Deoxyribonucleotide)n, Oral Neoplasm, BamC, Complete Exome, Neoplasms, tumor of the tongue, bam, tumour of mouth, Benign Neoplasm, Mouth Neoplasm, Tumor, Malignant, aligned, Oral Neoplasms, Deoxyribonucleic acids, fs(3)neo61, lip and oral cavity carcinoma, CG10422, Deoxyribonucleic Acid, tumour of the tongue, bim-beta7, Whole Transcriptome, Transcriptome Sequencing, tongue neoplasm (disease), DmelCG10422, lip and oral cavity cancer, Cancer of Tongue, WES, thymus nucleic acid, Complete, Exome Sequencings, TONGUE NEOPL, Oral Cancer, Malignancy, Oral, oral carcinoma, HCAP, bim-beta6, Complete Exome Sequencing, Whole Transcriptome Sequencing, tumour of tongue, Tissue, Double Stranded, Deoxyribonucleic acid, CDLS3, Sequencing, tongue tumor, Neoplasias, Whole Exome, Mouth Cancers, Clients, Whole, BMH., tumor of tongue, Mouth Cancer, Double-Stranded DNA, Malignancies, (Deoxyribonucleotide)m, deoxyribonucleic acids, NEOPL TONGUE, DNAn, CSPG6, 2410066K11Rik, Tongue Cancers, Cancer, Tumors, Tongue, Tongue Cancer, Complete Exome Sequencings, Malignant Neoplasm, Data Set, whole blood, DNAn+1, Exome, aligned to, ham, BOD, Double-Stranded, Client, oral cancer, NEOPL ORAL, (Deoxyribonucleotide)n+m, aln, Exome Sequencing, Oral Cancers, Benign, Neoplasm, Tongue Neoplasms, bod, ds-DNA, desoxyribose nucleic acid, Library, bimel, neoplasm of the tongue, Cancer of Mouth, Complete Transcriptome, tongue neoplasm, Complete Transcriptome Sequencing, Cancer of the Tongue, tumor of mouth, Exomes, Benign Neoplasms, Mouth, patient, Cancers, alpha, Malignant Neoplasms, Thm1, BIM, Patient, Bam-C, tongue tumour, ds DNA, BAM, Whole Exome Sequencing, Bam, Desoxyribonukleinsaeure, SMC3L1, mKIAA1992, DNA, other neoplasm, Transcriptome Sequencings, Neoplasia</description_synonyms></additional><is_claimable>false</is_claimable><name>ORCA-IN_WXS_Release27 - samples</name><description>This dataset pertains to whole exome sequencing of paired DNA samples of Gingivo-buccal oral cancer patient.DNA was isolated from the tumor and blood tissues of 47 patients (94 samples).We have performed Nextera exome capture and sequenced exome libraries in Illumina HiSeq platform.We have uploaded BWA-ALN aligned BAM files.</description><dates><updated>2018-03-12 05:51:15</updated></dates><accession>EGAD00001003987</accession><cross_references><TAXONOMY>9606</TAXONOMY><EGA>EGAC00001000010</EGA><EGA>EGAS00001002852</EGA></cross_references></HashMap>