{"database":"EGA","file_versions":[],"scores":null,"additional":{"omics_type":["Genomics"],"dataset_type":["Illumina HiSeq 3000;ILLUMINA"],"full_dataset_link":["https://ega-archive.org/datasets/EGAD00001004074"],"sample_count":["150"],"description":["EGA dataset EGAD00001004074"],"repository":["EGA"],"title":["DNA methylation (RRBS) data for the validation the glioblastoma progression study (GBMatch)."],"name_synonyms":["Vasp, VASP, DmelCG15112, ENHANCER OF ATNSI ACTIVITY, Data Set, MENA, NDPP1, l(2)02029, Enb, enb, ENA, Ena, CG15112, 2018., ENA/VASP"],"description_synonyms":["Brain, Brain Tumors, Primary Malignant Brain Neoplasms, Neoplasms, Primary Brain Neoplasms, Cancer of Brain, Brain Neoplasms, Benign Neoplasm, RNA-seq., DNA Methylations, broad, Grade IV, Tumor, Astrocytomas, Malignant, Brain Metastases, School-Age, Recurrent Brain Tumors, INTRACRANIAL NEOPL, Recurrent, Core Genome, Whole Transcriptome Shotgun Sequencing, glioblastoma, tumour of brain, Giant Cell Glioblastomas, School-Age Populations, study, reduced representation bisulfite-seq, DNA methylation maintenance, grade IV adult astrocytic tumor, tumour of the Brain, Genomes, Malignancy, brain neoplasms, Accessory Genome, Brain Malignant Neoplasms, Primary Brain Tumors, Brain Tumor, DNA methylation, Giant Cell Glioblastoma, Population, Astrocytoma, Neoplasias, Glioblastoma Multiforme, RRBS assay, PRIMARY BRAIN NEOPL, neoplasm of brain, Brain Neoplasm, Primary Malignant Brain Tumors, grade IV adult Astrocytic tumor, Clients, Recurrent Brain Tumor, Malignancies, Grade IV Astrocytoma, School Age Population, Methylations, tumor of brain, NEOPL INTRACRANIAL, Cancer, Tumors, WGS, grade IV adult astrocytic tumour, Intracranial Neoplasm, brain neoplasm, wide/broad, Malignant Neoplasm, Malignant Brain Neoplasms, Brain Benign Neoplasm, Benign Brain Neoplasms, Malignant Primary Brain Neoplasms, Primary, Primary Brain Neoplasm, Giant Cell, NEOPL BRAIN, Client, Pangenome, Primary Brain Tumor, adult glioblastoma multiforme, Benign, Brain Benign Neoplasms, primary glioblastoma multiforme, School Age, Brain Malignant Neoplasm, Neoplasm, Malignant Primary Brain Tumors, Brain Cancers, RRBS, Brain Metastase, Malignant Brain Neoplasm, Intracranial Neoplasms, glioblastoma multiforme, Primary Malignant, Populations, brain neoplasm (disease), Glioblastoma, spongioblastoma multiforme, Cancer of the Brain, Glioblastomas, GBM, Benign Neoplasms, whole genome, Cancers, tumor of the Brain, Brain Cancer, School Age Populations, Malignant Neoplasms, Intracranial, wide, Pan-genome, neoplasm of the brain, Grade IV Astrocytomas, Patient, brain tumor, Benign Brain Neoplasm, School-Age Population, DNA, brain tumour, other neoplasm, Methylation, Neoplasia"],"additional_accession":[]},"is_claimable":false,"name":"ena-DATASET-CeMM-12-04-2018-14:49:48:310-36 - samples","description":"Genome-wide profiling of DNA methylation levels by RRBS in 150 glioblastoma tumor samples. Patients were selected to represent the general population of glioblastoma patients based on Austrian Brain Tumor Registry. These DNA methylation profiles were created for the validation of the glioblastoma progression study (GBMatch) and consist of 106 profiles from FFPE samples and 44 profiles from fresh-frozen samples. For the 44 fresh-frozen samples also WGS data (43 genomes) and RNA-seq data (37 transcriptomes) have been produced for validation purposes.","dates":{"updated":"2018-06-20 12:51:11"},"accession":"EGAD00001004074","cross_references":{"TAXONOMY":["9606"],"EGA":["EGAC00001000689","EGAS00001002538"]}}