<HashMap><database>EGA</database><scores/><additional><omics_type>Genomics</omics_type><dataset_type>Illumina HiSeq 2000;ILLUMINA</dataset_type><full_dataset_link>https://ega-archive.org/datasets/EGAD00001004078</full_dataset_link><sample_count>96</sample_count><description>EGA dataset EGAD00001004078</description><repository>EGA</repository><title>Low-coverage Whole Genome Sequencing, Colorectal advanced adenomas, NKI-AvL TGO COCOS series</title><name_synonyms>Vasp, VASP, DmelCG15112, ENHANCER OF ATNSI ACTIVITY, Data Set, MENA, NDPP1, l(2)02029, Enb, enb, ENA, Ena, CG15112, 2018., ENA/VASP</name_synonyms><description_synonyms>Papillary Adenomas, cou, DNS, Data Set, Trabecular Adenomas, (Deoxyribonucleotide)n, Adenomas, Basal Cell, DNAn+1, number, Genome Sequencing, adenoma, Double-Stranded, Tl3, Tl2, presence, Microcystic, Deoxyribonucleic acids, Monomorphic Adenomas, (Deoxyribonucleotide)n+m, Relative, count in organism, Lr, Complete Genome, Monomorphic, Deoxyribonucleic Acid, Relative Risks, Trabecular, simple tissue, Low, ds-DNA, desoxyribose nucleic acid, Follicular, Relative Risk, 2018., acinar cell adenoma (morphologic abnormality), me75, thymus nucleic acid, Complete, Follicular Adenoma, Whole Genome, Microcystic Adenomas, Risk, Adenoma, acinar cell adenoma, Monomorphic Adenoma, Risks, Tissue, Complete Genome Sequencing, Double Stranded, Deoxyribonucleic acid, benign, Microcystic Adenoma, D17Mit170, T1, Sequencing, Papillary, Papillary Adenoma, Whole, ds DNA, cardinality, Bra, Basal Cell Adenoma, Desoxyribonukleinsaeure, Follicular Adenomas, Trabecular Adenoma, Double-Stranded DNA, (Deoxyribonucleotide)m, DNA, deoxyribonucleic acids, Basal Cell Adenomas, DNAn</description_synonyms></additional><is_claimable>false</is_claimable><name>ena-DATASET-NKI-13-04-2018-08:42:35:614-34 - samples</name><description>For this tissue dataset, we applied low-pass whole genome sequencing to 96 advanced adenomas. Advanced adenomas were classified as lesions with low-risk or high-risk of progression, according to the presence of specific DNA copy number changes (Carvalho et al, CancerPrevRes, 2018).</description><dates><updated>2024-07-23 11:10:03</updated></dates><accession>EGAD00001004078</accession><cross_references><TAXONOMY>9606</TAXONOMY><EGA>EGAC00001001051</EGA><EGA>EGAS00001002952</EGA></cross_references></HashMap>