{"database":"EGA","file_versions":[],"scores":null,"additional":{"omics_type":["Genomics"],"dataset_type":["Illumina HiSeq 2500;ILLUMINA"],"full_dataset_link":["https://ega-archive.org/datasets/EGAD00001004122"],"sample_count":["183"],"description":["EGA dataset EGAD00001004122"],"repository":["EGA"],"title":["The spatio-temporal evolution of lymph node spread in early breast cancer"],"name_synonyms":["Vasp, VASP, DmelCG15112, ENHANCER OF ATNSI ACTIVITY, Data Set, MENA, NDPP1, l(2)02029, Enb, enb, ENA, Ena, ICR, CG15112, 2018., ENA/VASP"],"description_synonyms":["primary breast cancer, IPP2A2, malignant tumor of the breast, Node, DNS, (Deoxyribonucleotide)n, region or site annotation, Metastasis, Complete Exome, Neoplasms, mammary neoplasm, Mammary Cancers, Human Mammary Neoplasms, Neoplasm Metastases, neoplasm metastasis, Tumor, PHAPII, cancer metastasis, Human, 5730420M11Rik, Breast Malignant Tumor, Deoxyribonucleic Acid, \"neoplasm of breast (disorder)\" EXACT [SNOMEDCT_2005_07_31:126926005], Breast Tumor, Lymph Nodes, \"mammary tumor\" EXACT [CSP2005:2016-0671], breast tumor, cancer of the breast, Whole Transcriptome, Transcriptome Sequencing, MIX, Lymph, BC, Mammary Neoplasms, malignant neoplasm of breast, SET, tumor cell migration, positional, WES, Human Mammary, thymus nucleic acid, Complete, Exome Sequencings, Genomes, TAF-I, Mammary Neoplasm, Complete Exome Sequencing, Mammary Carcinoma, Whole Transcriptome Sequencing, ipp2a2, Human Mammary Carcinomas, 2pp2a, Double Stranded, metastasis, Deoxyribonucleic acid, CG10574, Sequencing, Cancer of the Breast, DmelCG4299, IGAAD, set, geographical area, Whole Exome, 2PP2A, DmelCG10574, taf-ibeta, cancer of breast, Malignant Tumor of Breast, Mammary, Mammary Cancer, Clients, Whole, dSET, dSet, Double-Stranded DNA, (Deoxyribonucleotide)m, deoxyribonucleic acids, DNAn, Breast, mammary cancer, mammary tumor, Breast Malignant Neoplasms, tumor metastasis, Tumors, Cancer, phapii, Breast Carcinoma, Human Mammary Neoplasm, Carcinoma, Breast Carcinomas, \"breast neoplasm\" EXACT [MTH:120], Complete Exome Sequencings, lymphatic system, DNAn+1, Metastases, Exome, igaad, StF-IT-1, Double-Stranded, \"breast tumor\" EXACT [NCI2004_11_17:C2910], Client, group, Breast Malignant Neoplasm, (Deoxyribonucleotide)n+m, Metastase, Exome Sequencing, I-2PP2A, Mammary Carcinomas, Dm I-2, I2PP2A, Neoplasm, sequence, Human Mammary Carcinoma, NOS, MIXL, ds-DNA, desoxyribose nucleic acid, Malignant Neoplasm of Breast, nodus lymphaticus, Carcinomas, MILD1, Complete Transcriptome, Breast Neoplasm, Complete Transcriptome Sequencing, HLA-DR-associated protein II, positional polypeptide feature, ensemble, DI-2, Lymph Node, Deoxyribonucleic acids., I-2Dm, CG4299, Cancers, whole genome, \"mammary neoplasm\" RELATED [], primary structure of sequence macromolecule, I-2PP1, dSET/TAF-Ibeta, Lymph node, 2610030F17Rik, TAF-IBETA, breast cancer, Patient, Breast Tumors, Breast Cancer, Nodes, ds DNA, Whole Exome Sequencing, Breast Malignant Tumors, Desoxyribonukleinsaeure, Cancer of Breast, lymph gland, TAF-Ibeta, DNA, AA407739, other neoplasm, i2pp2a, cancer, Transcriptome Sequencings, breast"],"additional_accession":[]},"is_claimable":false,"name":"ena-DATASET-ICR-17-05-2018-09:58:24:856-173 - samples","description":"Set of multi-region sequenced breast cancer primary samples, lymph nodes and ctDNA. We collected samples from 11 breast cancer patients with lymph node involvement but no sign of distant metastasis. We performed a mix of whole-exome sequencing, targeted capture sequencing, and whole-genome sequencing of primary tumour samples and lymph nodes, as well as targeted capture sequencing of circulating tumour DNA.","dates":{"updated":"2018-07-17 08:51:01"},"accession":"EGAD00001004122","cross_references":{"TAXONOMY":["9606"],"EGA":["EGAC00001000890","EGAS00001002947"]}}