{"database":"EGA","file_versions":[],"scores":null,"additional":{"omics_type":["Genomics"],"dataset_type":["N/A"],"full_dataset_link":["https://ega-archive.org/datasets/EGAD00001007563"],"sample_count":["516"],"description":["EGA dataset EGAD00001007563"],"repository":["EGA"],"title":["252 human breast cancer samples in WGS and WES"],"additional_accession":[]},"is_claimable":false,"name":"ab505495-c71d-43e4-978c-c25fbd36b3b0 - samples","description":"We analyzed chromothripsis in 252 human breast cancers from two patient cohorts (149 metastatic breast cancers, 63 untreated primary tumors, 29 local relapses, 11 longitudinal pairs) using whole-genome and whole-exome (paired) sequencing. A lot of the WGS samples were sequenced on Illumina HiSeq X-Ten using Illumina TruSeq Nano DNA. For exome sequencing Agilent_SureSelect_V5+UTRs has been used (sequencing on Hiseq2000, Hiseq2500 and Hiseq4000). For exome sequencing Agilent_SureSelect_V5+UTRs has been used (sequencing on Hiseq2000, Hiseq2500 and Hiseq4000).","dates":{"updated":"2021-04-26 11:22:53"},"accession":"EGAD00001007563","cross_references":{"TAXONOMY":["9606"],"EGA":["EGAC00001000452","EGAS00001004662"]}}