<HashMap><database>EGA</database><scores/><additional><omics_type>Genomics</omics_type><dataset_type>N/A</dataset_type><full_dataset_link>https://ega-archive.org/datasets/EGAD00001007563</full_dataset_link><sample_count>516</sample_count><description>EGA dataset EGAD00001007563</description><repository>EGA</repository><title>252 human breast cancer samples in WGS and WES</title></additional><is_claimable>false</is_claimable><name>ab505495-c71d-43e4-978c-c25fbd36b3b0 - samples</name><description>We analyzed chromothripsis in 252 human breast cancers from two patient cohorts (149 metastatic breast cancers, 63 untreated primary tumors, 29 local relapses, 11 longitudinal pairs) using whole-genome and whole-exome (paired) sequencing. A lot of the WGS samples were sequenced on Illumina HiSeq X-Ten using Illumina TruSeq Nano DNA. For exome sequencing Agilent_SureSelect_V5+UTRs has been used (sequencing on Hiseq2000, Hiseq2500 and Hiseq4000). For exome sequencing Agilent_SureSelect_V5+UTRs has been used (sequencing on Hiseq2000, Hiseq2500 and Hiseq4000).</description><dates><updated>2021-04-26 11:22:53</updated></dates><accession>EGAD00001007563</accession><cross_references><TAXONOMY>9606</TAXONOMY><EGA>EGAC00001000452</EGA><EGA>EGAS00001004662</EGA></cross_references></HashMap>