EGAGenomicsN/Ahttps://ega-archive.org/datasets/EGAD0000100765543EGA dataset EGAD00001007655EGAfalsed0c02785-f55c-4dac-858e-5446ecc5c8fb - samplesThis dataset includes all FASTQ files for 11 samples where different capture-based methods for transcriptome profiling have been tested. Specifically, we have the 'traditional' RNA-seq experiment with fresh frozen (FF) material, and 3 different capture methods for the matching formalin-fixed paraffin-embedded samples: Agilent (AGI), IDT, and Twist Biosciences (TBS). In total, there are 43 samples with paired-end FASTQ files (1 sample did not have sufficient material to test all methods). Samples are identified by the R01-R11 IDs with a suffix that indicates the capture method used (or FF for fresh frozen).2021-09-02 12:11:42EGAD000010076559606EGAC00001002098EGAS00001005255