<HashMap><database>EGA</database><scores/><additional><omics_type>Genomics</omics_type><dataset_type>N/A</dataset_type><full_dataset_link>https://ega-archive.org/datasets/EGAD00001008149</full_dataset_link><sample_count>1</sample_count><description>EGA dataset EGAD00001008149</description><repository>EGA</repository><title>Whole exome data from PMID27216186</title><name_synonyms>4A11, CG13057., DmelCG13057</name_synonyms><description_synonyms>whole exome, human being, region or site annotation, Neoplasms, Benign Neoplasm, Tumor, Malignant, aligned, Human, clinical study, melanoma (disease), Enrich, SEQUENCING, Biopolymer Sequencing, Processed Data, sequencing assay, Homo sapiens, melanoma, Contains, Man, Group, study, Somatic, positional, Targeting, Clinical Studies, Cancer Research Programs, Man (Taxonomy), Illumina., Malignancy, Illumina Sequencing, Naevocarcinoma, Matched_Normal, Target, Cancer Research Project, Derived Data, Comprise, Contain, Sequencing, Neoplasias, Study, Panel Device, geographical area, Multi, Clients, Panel, Malignancies, Cancer, Tumors, TARGET, Molecular Biology, sequencing_assay, target_lesion, Malignant Neoplasm, Target Lesion Identification, Data Set, Index, malignant, MULTIPLE, Modern, Targeted, aligned to, Malignant Melanomas, somatic, Client, Clinical Study, Contained, CLINICAL STUDY, Melanomas, Benign, Melanoma, Malignant Melanoma, Neoplasm, sequence, NOS, Illumina Sequencing Technology, Library, Enrichment, Destination, positional polypeptide feature, Nucleic Acid Sequencing, Exomes, Matched Tissues, Benign Neoplasms, Containing, Clinical Research, Cancers, Cancer Research, primary structure of sequence macromolecule, human, NUCLEIC ACID SEQUENCING, Malignant Neoplasms, Multiple, Patient, Matched Normal, Modern Man, target lesion, malignant melanoma, other neoplasm, Sequence Analysis, Neoplasia</description_synonyms></additional><is_claimable>false</is_claimable><name>d8379675-935e-4a11-8c9b-bf8b3626e2dc - samples</name><description>This dataset comprises complete exome data from from the study PMID27216186 (Harbst &amp; Lauss et al, Cancer Research 2016). These data are from 49 samples (tumor and matched normal) from 8 patients representing multi-region sequencing of human melanoma. Files are in the BAM format and contain aligned and processed data used for e.g. somatic variant calling. The sequencing libraries were constructed using SureSelect target enrichment with Clinical Research Exome Panel (Agilent) and sequenced on a HiSeq2500 (Illumina).</description><dates><updated>2022-01-27 14:47:30</updated></dates><accession>EGAD00001008149</accession><cross_references><TAXONOMY>9606</TAXONOMY><EGA>EGAC00001002322</EGA><EGA>EGAS00001004320</EGA></cross_references></HashMap>