{"database":"EGA","file_versions":[],"scores":null,"additional":{"omics_type":["Genomics"],"dataset_type":["N/A"],"full_dataset_link":["https://ega-archive.org/datasets/EGAD00001009827"],"sample_count":["8"],"description":["EGA dataset EGAD00001009827"],"repository":["EGA"],"title":["WGS of off-target analysis of base editing in organoids"],"additional_accession":[]},"is_claimable":false,"name":"6d53bbad-7d44-4020-9b30-584400758e55 - samples","description":"Seven clonal organoid lines and one bulk wild-type control sample were paired-end whole-genome sequenced using the Illumina Novaseq 6000 system. We sequenced four clonal intestinal organoid lines harbouring engineered TP53 and FBXW7 mutations as well as three lines targeted for oncogenic APC/TP53/PIK3CA/SMAD4 mutations. The reads were mapped to hg38 genome assembly and data is provided as BAM files.","dates":{"updated":"2023-01-03 12:22:20"},"accession":"EGAD00001009827","cross_references":{"TAXONOMY":["9606"],"EGA":["EGAC00001001864","EGAS00001006886"]}}